Hafnia paralvei: AL518_18320
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Entry
AL518_18320 CDS
T05667
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
hpar
Hafnia paralvei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_16
TPR_1
TPR_2
TPR_Slam
Motif
Other DBs
NCBI-ProteinID:
AMH19781
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Position
4096126..4098063
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AA seq
645 aa
AA seq
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MSYLNPRWENVAFAAFLILPTVPYPVCAAIVEEPSVSELMALGAPTLAWDKIQKKPQLNQ
KLQAEEIAQHRLSLYLRWGLDESRNDNGPQRLIPLNETVNNEQEFLTTYTRKNASAYLQV
LGDQIVALSAKGDARMAIVRADELEKLTALPAYVSVARGDAFMQLEQPEKAVASYEYALT
HALPGEIDPIPTQEMLFYALLDCGRYEQAEKLLSDLEPNTPQWVRLSAAPGLVNPDYATV
KKMRAQYTLYSGNITLGQRQIDNLVHSAPMNDDLLTTQAQAYLLRDLPTHSAQAYRIALN
QTPDSLEARAGLGEASLARRDFELSQTIYQQLSHGFEDNHSVTQFVDHYQHEQLPYFTSD
ASGGRGNGTLSDYDWQIDSHLYSAPIQQNWRLFAHQFTGRGKTEEGTPLRVRNGAGIDFR
ATQWLNTLEINRSNGSAAKTGVATQLSYLPSDHWQFDVGYDNNSNELAWKAYDNGISSKQ
TTAAVHYQTDSTRSAELSYQNQRLSDGNLSQTWQASATQMLWTKPRHRLDASLALSTSSN
RLSDAEYFSPERDYSAGVTLLHQWTPWQSSRRHFTQRTYLTAGEYQQRHFGNSLFAELRL
EHQWALTAYSELTYGIGINTHRYDESRENRTLFYLSLTLPLGSAL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgagttatttaaaccctcgttgggaaaacgtggcgtttgcggccttcctgatattaccc
actgttccatatccagtctgcgcagctatcgtggaagagccttcagtttctgagctaatg
gcgttaggcgcgccaacgctagcctgggacaaaatccaaaagaaaccacagctgaaccaa
aaacttcaagcagaagaaatcgctcagcatagactgagcctttacctgcgttgggggttg
gacgaaagtcgcaatgataatggcccgcagcgtctcatccctctcaatgagaccgttaat
aacgagcaagaatttcttacgacttatacacgtaaaaacgcttcggcataccttcaggtt
ctaggcgatcaaatcgtcgcattgagtgccaaaggcgatgctcgtatggctatcgttcgt
gcggatgaactcgaaaaactcacagcgttgcctgcctacgtcagcgtcgctcgcggcgat
gcatttatgcagttggaacagcccgagaaagccgtggctagttatgaatatgctttaact
cacgctttacctggagagatcgacccgattcccacacaagaaatgctgttctatgcccta
ttagactgtggtcgttatgaacaagctgaaaagctgttgtccgatcttgagcctaataca
ccgcaatgggtcagactcagcgccgcacctggcctcgtaaatccagactacgctacggtc
aagaaaatgcgggcgcaatatacgctgtacagcggaaacatcacgctgggccaacggcaa
attgacaacttggttcactctgcgccaatgaatgatgacctgcttaccacacaggctcaa
gcctatctgctacgagacttaccgacacactcagcccaggcctatcgtattgcactgaat
caaacgccagacagcctagaggcacgtgccggacttggcgaagcctctctggcacgccgt
gattttgagcttagccaaaccatttatcagcaattatctcatggttttgaagataaccat
tcggttacccagtttgttgatcactatcagcatgagcaactgccctattttacttccgac
gcgagcggcggacgtggtaacggcacactgagcgattatgactggcaaatagatagccac
ttatattcggcgccgattcagcaaaactggcggctgtttgcacatcaatttaccggccga
gggaaaacagaagaaggcacaccgctacgcgtacgtaacggtgctggtatagattttcga
gctactcagtggctgaatactttagaaatcaaccgtagcaatggtagcgctgcgaaaact
ggggtcgcaacccaacttagctatttgccttccgaccattggcaattcgatgttggatac
gataacaacagcaatgaactcgcatggaaagcctacgataacggtatcagcagcaagcaa
actaccgcagccgtacattatcaaaccgacagcacccgttctgccgagcttagctatcaa
aaccagcgcttaagcgacggcaatcttagccagacgtggcaggcctctgcaacacagatg
ctatggacgaaaccacgccatcgactggatgcctcgctggcgctttccaccagcagcaac
cgcttatctgatgctgaatatttcagccctgaacgcgactattcggccggagtcaccctg
ttacatcaatggacgccctggcaatcctcgcggcgccattttacccagcgtacctacctc
accgcaggtgaatatcagcagcgtcattttggcaatagcctgtttgccgaactcagactc
gagcatcagtgggcgctcactgcctattcagaactcacctatggcatcggaattaatact
catcgctacgacgaatcgcgcgaaaacagaacccttttttatctgtcactgacactacct
ctaggaagcgcgctatga
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