Hafnia paralvei: AL518_19245
Help
Entry
AL518_19245 CDS
T05667
Name
(GenBank) HTH-type transcriptional activator RhaS
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
hpar
Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpar03000
]
AL518_19245
Transcription factors [BR:
hpar03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AL518_19245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
HTH_20
PriC
Motif
Other DBs
NCBI-ProteinID:
AMH19942
UniProt:
A0A2A2MG74
LinkDB
All DBs
Position
complement(4290823..4291644)
Genome browser
AA seq
273 aa
AA seq
DB search
MTVLHSIDFFSSGYAPVAIEPRAPQPEFPEHHHDFYEIVIVEQGAGVHVFNGNPYTLNSG
CVCFVRDHDRHLFEHTDGLFLTNVLFRSPDAFKFLSGVEQFLPSERNGVYPSHWRISQQV
LQQVKVLMSKLEQAPDSERAEDIALHESVFMQLIVQLWQGCSAQIGDDQEGRLRQLLDWL
QDHYAESVEWSELADRFSLPLRTLHRQLKNHTGMTPQRYLTRLRLLQARHQLCHSDNSIT
DIAYQCGFGDSNHFSTLFKREFDQSPRALRCQS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgactgttttgcacagcattgattttttctcttccggctatgcgcccgtcgcgatagag
ccgcgagcaccgcagcctgagtttcctgagcaccatcatgatttctatgaaatcgttata
gtggaacagggcgctggcgtacatgtatttaatggtaatccttacacgcttaacagcgga
tgtgtatgttttgtccgtgaccatgaccgccatttgtttgagcatacggatggattgttt
ttaaccaatgtcctgtttcgttcaccggatgcatttaaatttttgtcaggtgttgaacaa
tttttgccgagcgagcgtaacggcgtttacccttcgcattggagaatcagccagcaggta
ttgcagcaggtcaaagtcttaatgtcgaagttagagcaggcgccagacagcgaacgagcc
gaagatatcgccttacatgaaagcgtttttatgcagctaattgtacagctttggcaaggc
tgctcagcgcaaattggtgatgaccaagaagggcgtttacgtcagttgctcgattggcta
caagaccactatgcggagtcagtggaatggtcagaattagctgatcgtttttctttaccg
ctgagaacgttacatcgccagctaaaaaatcatacaggcatgacaccacagcgttatctc
actcgactgcggcttttacaggctagacatcagctttgtcacagtgataacagcataacg
gatatcgcttaccagtgcggtttcggtgacagcaatcatttctctaccttattcaaacgc
gagtttgaccaatcaccgcgggcgttacgctgccagtcatag
DBGET
integrated database retrieval system
