Hafnia paralvei: AL518_19765
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Entry
AL518_19765 CDS
T05667
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
hpar
Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpar03009
]
AL518_19765
Enzymes [BR:
hpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AL518_19765
Ribosome biogenesis [BR:
hpar03009
]
Prokaryotic type
rRNA helicases
AL518_19765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
Cas3-like_C_2
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AMH20035
UniProt:
A0A2A2MFX8
LinkDB
All DBs
Position
4405036..4406364
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AA seq
442 aa
AA seq
DB search
MTASNFSELELDERLLDALRDKGYDRPTAIQAAAIPPAMDGRDVLGSAPTGTGKTVAYLL
PVLQHLLDFPRKKSGPPRVLVLTPTRELAMQVAEQAIELAKHTNLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAAETRW
RKQTMLFSATLEGDAIKEFSERLLQDPVEIEADPSRRERKKIQQWYYRADTLEHKTKLLC
HLLKEPEVTKSVIFVRKRERVHELVGWLREAGINSCYLEGEMVQAKRNEAMKRMLDGRVN
VLVATDVAARGLDIPDISHVFNFDMPRTADTYLHRIGRTGRAGRKGIAISLVEAHDHLLL
GKISRYVEEQIKSRVVDELRPTTKPPSEKNKGKPSKKTLLKRQEKKDEEKKDKKVKVRHR
DSKNVGKRRKPKAAQSVTPTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaagcaatttttccgaactcgaactcgatgaacgcctactcgacgcattacgc
gacaaaggctatgaccgcccgacagccattcaagctgccgccattcctccggcaatggac
ggtcgcgacgttctgggttcagcacctaccggaaccgggaaaaccgtcgcctatttgctg
ccagtattgcagcacctgctcgacttcccgcgtaaaaaatccggcccaccacgtgtattg
gtgctgactccaacgcgtgaattggcaatgcaggttgccgagcaagccatcgaattggct
aaacatacaaatttggatatcgcgaccatcaccggtggcgttgcctacatgaatcacgct
gaagtgttcagcgaaaatcaagacatcgtggttgcaaccactggccgtctgctgcaatac
atcaaagaagaaaacttcgattgccgcgcggttgaaaccctgatccttgatgaagcagac
cgcatgctcgacatgggttttgcacaagatatcgaaactatcgctgcagaaactcgctgg
cgtaaacagactatgctgttctcagcaacgctggaaggcgacgcaattaaagagttctct
gagcgtctgctgcaggatcctgtcgaaatcgaagccgatccttcacgccgtgagcgtaag
aagatccagcaatggtattaccgcgccgatactcttgagcacaaaaccaagctgctgtgt
catttgctaaaagagcctgaagtcaccaaatccgttattttcgtgcgtaagcgcgagcgc
gtgcatgaactggtaggctggctgcgcgaagcgggtatcaactcctgctatttagaaggc
gagatggtgcaagctaagcgtaatgaagccatgaagcgcatgcttgatggccgagtgaac
gtgttggttgcaaccgacgtcgccgcgcgtggtctggatatcccagacatcagccacgtc
ttcaacttcgatatgccacgcaccgctgacacctatctacaccgtattggccgtaccggt
cgcgcaggtcgtaaaggcatcgcaatttctctggtggaagctcatgaccatctgctgctg
ggcaaaatcagccgctatgtcgaagagcaaattaaatctcgcgtggttgacgaacttcgt
ccaaccaccaagccgccaagcgagaagaacaaaggtaagccgtctaagaagacgctgctc
aagcgccaagagaaaaaagacgaagagaagaaagataaaaaggtaaaagtgcgtcaccgc
gatagtaaaaacgtcggaaaacgccgtaagcctaaagccgcacagtcagtgaccccaact
gaagaataa
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