Hafnia paralvei: AL518_20125
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Entry
AL518_20125 CDS
T05667
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
hpar
Hafnia paralvei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Pertactin
Trypan_PARP
AIDA
Motif
Other DBs
NCBI-ProteinID:
AMH20099
LinkDB
All DBs
Position
complement(4466950..4469892)
Genome browser
AA seq
980 aa
AA seq
DB search
MRLTISHALLPVIYLVALPLNAADSIPESFQPKKESTVPTDLKTNSSYQDSWDYTQEKWG
QKYPNLQIKDNKYLADRDIVLLNPAFSKQVVTLINHSYSVGNTLNSVQLNIGDGINEANG
SEALNTLVKGEYVNSRGNIETGVLSVNSNGKAFNTVVDAYGSLSVSGDGEVYNSLIKTGG
LQVLGTRAYAQANIIDGGVQQLSVTGNAVAEDNIVKNGGQQIIYAGTAKNSHIGDGSYQL
ASGLAQDTVLYSGAFQEVYSGKGETHVADSNTQVLAGAFQQITSGISENAQVYGTQTVSG
VDVTWKDGSWTSDEGSKIRINGQTAKNSTIYAGGKQRIQSGTADGTQVYGVQTISGQKGG
WVDGKWVDADGYTGGIRANATNTTVYAGGLQQIAWYGEADQNIIDGGTQQVDELGHISNT
TIQNGGASTIAYGAYSSGDLIVKDGSLSMQAGSDHAWTENLGKGAYAANVDLQSDNAYLY
IQHNDAAPESVVTIKQLTNNGVVNFGAKNGSDSGRFSRLDLNTLSGSGTFIMNTNLAGEE
GDFLNISDSVSGNFHVLVRDSGYELTGSGANPYHLIYANGSSADTFAMTNGSVDLGAYKY
YLVHGDASDKDNWYLSPTAVKPNPEPDPDPKPDPDPTPDPDPTPDPGTDPGTDPQPEPEP
TPEPTPEPTPNPGPGTKPELSESAKSVLAMANVTPTIWDAELSTLRSRLGEVRNNQQNDT
GVWGKYISSRYRISTSNVGYNQDLNGVMFGGDRTIALDNAQMIVGGMASYTHSELEASKS
NGKVDSYSVGAYITWLHDSGYYLDGVVKANRFRTENNPYFNGGRAHAHDNSFGAGFSLEA
GKHISFDDYFVEPYLQAAFFRGERSEYKLDSGMKVKADAAKSVKGELGTTLGKNVTLANG
ATIQPYMRLAVRHEFMKDNAVVINNTEHFTNDMSGTSGKYGLGITTRMNDRWAAYGEINY
EMGHHIETPYSGQIGVRYSF
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgagacttacaatctcacatgcgctgcttccagtcatctatctggttgcattaccgctg
aatgctgcggattcaataccagagtctttccaacctaaaaaagaatcgactgttcctact
gacttgaagactaactctagttatcaggactcatgggactatacccaagagaagtggggg
caaaaatatccaaatctgcaaatcaaagataataaatatcttgctgaccgtgacattgtt
ttactcaatcctgcgtttagcaagcaagttgtaacgctaatcaaccattcgtacagcgtt
ggcaatacgctgaattcggtgcagctcaatattggtgatggaatcaatgaggcgaatggc
tcagaagcgctgaataccctcgtaaaaggggagtatgttaacagcagaggcaatattgaa
acgggggtattgtctgttaatagcaatggtaaagcctttaataccgtggttgacgcttac
ggttcgctttcagtttctggcgatggcgaagtttataattcactaataaaaactggcggt
ttacaagttttaggcacccgtgcctacgcgcaggccaatattatcgatggcggtgttcaa
cagctatcggtcacgggaaacgccgtggctgaagacaacatagtcaaaaatggtggtcaa
cagattatttatgctggcaccgcaaagaactcgcacattggtgacggtagctaccagttg
gccagtggcttagcgcaagacaccgttctttatagcggtgcgttccaagaggtctattca
ggcaaaggagagacgcacgttgccgatagcaacactcaagtactggcaggcgcttttcag
caaattacctccggtatttcagaaaatgctcaggtatatggcactcaaacggtcagcggc
gttgatgtgacttggaaggatggtagttggacatcagatgaaggttctaaaatcagaatt
aatggccaaacagctaaaaattcaactatctatgcgggcggtaaacagcgaattcagtct
ggcactgcggatggtactcaagtctatggggtgcaaaccatcagcgggcaaaaaggcggc
tgggtcgatggtaaatgggtcgatgccgatggctatacaggtggcatcagggctaatgcg
actaataccacggtttatgcaggcggtttacagcaaatagcatggtatggtgaagccgat
caaaacatcattgacggcggaacccagcaggttgatgagcttggtcatatatcgaatacc
actattcagaacggtggggctagcaccattgcctatggcgcttattccagcggagatctg
atcgttaaagatggctcgctgagtatgcaagcaggaagcgatcacgcatggactgaaaac
ctaggtaaaggcgcttatgcagcgaacgtggatctgcaaagcgataacgcttatctctat
attcagcacaacgatgcggcgccagagtccgttgtaacgatcaaacagctaactaataat
ggcgtggtcaattttggtgcgaaaaatggcagtgatagtgggcgtttcagccggctcgat
ttaaacacgctgagcggaagcggtacgttcatcatgaatactaatcttgctggtgaagag
ggggatttcctcaatatctctgattcggtcagcggcaattttcatgtgctcgttcgtgac
tctggctatgagctgactggcagtggagccaatccgtaccatctgatatatgctaacggt
agttcggcagatacttttgctatgaccaatggcagcgttgatttaggtgcctacaagtat
tatctggtacacggcgatgcgagtgataaagataattggtatctatcccccacagccgtt
aagccaaacccggagcccgatccagatccgaagccggacccagatccaacgccggaccca
gatccaacgccagatcctggtactgatcccggcaccgatccgcaaccagagccggaacca
acgccagagccaacaccagaaccgacgcctaatccagggccaggtactaaacctgaactc
tcggaaagtgcaaaatccgttctcgcgatggctaacgtaactccaacgatttgggatgct
gagctttcaacgctgcgcagtcgtttgggtgaagtgcgtaacaatcagcagaatgacact
ggtgtgtgggggaaatacattagtagccgttaccgcatttcaaccagcaacgtgggatat
aaccaagatctgaacggggtcatgttcggaggcgatagaaccattgctttagacaacgcc
cagatgatagttggcggcatggcgtcatatacccattccgagcttgaagcatcgaagagc
aatggcaaagtcgatagctacagcgtgggtgcctatatcacttggctgcacgacagtggt
tactatttggatggggtggtgaaagcgaaccgtttccgtactgaaaacaatccgtacttt
aacggtggtcgagcgcacgcgcacgataatagctttggtgccggtttctcgcttgaggcc
ggaaaacatatctcatttgatgactattttgttgagccttatctacaggcggcattcttc
cgcggcgagcgaagcgaatataagctcgacagcggtatgaaggtgaaagctgatgcagcg
aagtcagtcaaaggtgagttaggtacaacgcttggaaaaaacgttacccttgctaatggc
gcaaccattcagccttatatgcgtctggcggttcgacatgagttcatgaaggataatgcg
gtggtcattaataacactgaacacttcaccaatgatatgtccgggaccagtggaaaatat
ggtctaggtatcactactcgtatgaacgatcgctgggcagcctatggtgaaatcaactat
gaaatgggtcaccatatcgaaacgccatacagcggccagattggcgtccgttattcattc
tag
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