Glaesserella parasuis SH03: JL26_03335
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Entry
JL26_03335 CDS
T03301
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
hpas
Glaesserella parasuis SH03
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpas03016
]
JL26_03335
Enzymes [BR:
hpas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
JL26_03335
Transfer RNA biogenesis [BR:
hpas03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JL26_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
FAD_binding_2
Pyr_redox_3
NAD_binding_8
Pyr_redox_2
Pyr_redox
HI0933_like
FAD_oxidored
ThiI
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AIK16914
LinkDB
All DBs
Position
complement(599470..601473)
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AA seq
667 aa
AA seq
DB search
MSKITFASLNFNQSNTPVSAQFDDIYFSTQDGLAESHYVFQEGNQLWEKWQRHPRSFFVI
AETGFGTGLNFFAVAEKFKEFLAEYPTSPLKRLYFISFEKFPIKTEQLQQIHQHYPQFAN
FSAQLTACWQPRQSGCQRYHFEQIYLDIWFGNLLENLPQLGDYYNNLIDCWFLDGFSPDK
NPEMWNESLYQQMFRLTQAGGSFATFTASSNVRRGLQAVGFEVKKRKGFGKKREMLWGEK
PDNQTENHIRFPYFYQSNQTESDDVAIVGGGIASLAVALSLLERGKQVTLYCKDEQLAKN
ASGNLQGAIYPQLSDDDERNVRFYVHSFDYALQRFKQLAQAVTFEHDFSGVALYAYNDKT
AHKLQKMAEQGWDSELYQLCSAQDLSEKIGLTVQNGGAFIAQGGWLSPVQFVQNAFALLQ
QRGLKVVLNHQVENPVWLAGKWQWQHQGQTFAHQTLVLANGHLLTDFAQSHGIPLYPVRG
QVSQIPTTEALSKLKCVVCYDGYLTPSSAQQTHCIGASHLRDNADEQFSLVEHEQNIAKL
QQNLTACEWTQQLDFSGNLAKVGIRAAFRDRVPMVGAVPDFEAQKTQYANLYNQFRRREP
IETANCYPNLYLVAGLGSRGLTTAFLLGELLASQICGEPLPLSQDILQGLSTNRTWIRNL
LRGREIT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattacctttgcttctttaaattttaatcaatcaaatacccctgtttcagca
cagtttgatgatatttatttttctacgcaagatgggctggcggagagccactatgtcttt
caagagggtaatcaactgtgggaaaaatggcaacgacacccccgatctttctttgtgatt
gccgaaacaggctttggaacaggactgaatttttttgcagtggcagaaaagtttaaggaa
tttttagcggaatatccgacttcaccacttaaacggctctattttatctcttttgaaaaa
tttccgataaaaaccgaacaattacagcaaattcaccaacattatccgcaatttgcaaac
ttttcggcacaattaaccgcttgttggcagcctagacagagcggttgtcagcgttaccat
tttgaacaaatttaccttgatatttggtttggcaacctattagagaatttgccacaactg
ggcgactattataacaatctgattgattgctggtttttagatggcttttcgcccgacaaa
aatcctgaaatgtggaacgaaagcctttatcagcaaatgttccgcctaacacaagcgggc
ggatcttttgcgacttttaccgcatcaagcaatgtccgccgtggattgcaagcggtcggt
tttgaggtgaaaaaacgtaaaggtttcggcaaaaaacgtgaaatgctgtggggcgagaag
cctgacaatcaaacggaaaaccacattcgctttccttatttttatcaatctaaccaaaca
gagagcgatgatgtggcgattgtcggtggcggtattgcaagccttgctgttgccttgtct
ttgctagaacggggcaaacaggtcacactttattgtaaagatgaacagttagcaaaaaat
gcgtctggcaatttacagggggcgatttacccacaactcagcgacgatgatgagcgaaat
gtgcgtttttatgtgcatagctttgattatgcattgcaacgttttaagcagttggctcaa
gcggtcacatttgaacacgatttttcaggggtggcattgtatgcttataacgataaaacc
gcacacaaactgcaaaaaatggcggagcaaggttgggatagcgaactttatcaactctgc
tcagctcaagatttgagtgaaaaaataggcttaacggtacaaaatggtggtgcttttatt
gctcagggcggttggctttcacctgtgcagtttgtgcaaaatgcctttgctttattgcaa
caacgaggcttgaaggtggtgttaaatcatcaggtggaaaatcctgtgtggcttgcagga
aaatggcaatggcaacatcaagggcaaacctttgcccatcaaaccttagtgttggcaaac
gggcatttattaaccgattttgctcagagccacggtattcccctttatcctgtgcgtggg
caagtcagccaaatcccaacgacagaagccttgtcgaagttaaaatgtgtggtttgttat
gatggctatttaacgccgagctcagctcaacagacccattgtatcggggcaagccattta
agagacaatgccgatgaacagttcagtttagtggaacacgagcaaaacattgcaaaactt
cagcagaatttgaccgcttgtgaatggacgcaacagcttgatttttcaggaaatcttgcc
aaagtcggcattcgtgcggcatttcgagatcgtgtgccgatggtgggggctgtgccggat
tttgaagcacaaaaaacgcaatatgctaacttgtataatcaatttcgccgtcgagagccg
attgaaactgccaactgctatccaaatctctatttagtcgcagggcttggctcacgaggt
ttaaccaccgcctttttattgggcgaattattagcgagccaaatttgtggcgaaccgctt
ccccttagccaagatattttgcaagggttaagcacaaatcgaacctggatacggaatttg
ttgaggggaagagagataacataa
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