Glaesserella parasuis SH03: JL26_04085
Help
Entry
JL26_04085 CDS
T03301
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hpas
Glaesserella parasuis SH03
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpas03016
]
JL26_04085
Enzymes [BR:
hpas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JL26_04085
Transfer RNA biogenesis [BR:
hpas03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JL26_04085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
COG6_N
Motif
Other DBs
NCBI-ProteinID:
AIK17028
LinkDB
All DBs
Position
complement(741715..742842)
Genome browser
AA seq
375 aa
AA seq
DB search
MNKYIEYQWVDDNPSLAQMCLQVAEQSVIALDTEFVRTRTYYPKLGLIQLFDGKQMYLID
PLSITDFSPFTALLTNENVLKVLHACSEDLEVFQHYFKQLPQPMLDTQVMAGFVGIGISI
GFAKLALHYLEVELDKGASRTDWLSRPLSEIQLQYACADVWYLLPIYHKLAEDLAKTPWQ
TAVVEECATLLAKRQIVEDPNKAYKEISNAWQLNQQELAILQILAKWRIEEAEKRDLALN
FIIKEQSLLQIAKLQPKHTSILLEFMHPNEVRIHGKKILWLVELGKQILPENYPPVIRRL
VDEAGYKTTFKRLQKRLAEVCPENLAIELLASKRQLNQLFKWYRNGQDRQKLPELLCGWR
EQFGNKLLTEIDLSK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtatatagaatatcagtgggttgatgataatcctagtttggctcagatgtgt
ctgcaggttgcagaacaatcggtgattgcgttagatactgagtttgttcgtactcgaact
tattatccgaagttggggttaattcagctttttgatggtaagcagatgtatttgattgat
ccgttaagtattacggatttttccccttttactgcgttgttaacaaatgaaaatgtgctt
aaggtacttcacgcttgtagtgaagatttggaagtttttcaacactatttcaaacagtta
ccgcaaccaatgttagatacgcaggtgatggcagggtttgtggggataggtatttcaatt
ggctttgccaaacttgcgttgcattatcttgaggttgaattggataaaggggcttctcgc
acagattggttgagccgtcctttgagtgagatacaacttcaatatgcctgtgcagatgtg
tggtatttgttgccgatttatcacaaattggcggaagatttagcaaaaacaccgtggcaa
actgccgtcgtagaagagtgtgcaactttgttagctaaacggcagatcgtagaagatccg
aataaagcctataaggaaatcagtaatgcgtggcaacttaaccaacaagagctggcaatt
ttgcagatattagctaagtggcggatagaagaagcagaaaaacgtgatttggcattaaat
tttattattaaagagcagagtttgttacaaattgctaaattacaaccgaaacatacttca
atcttgttggaatttatgcacccaaatgaagtgcgtattcacggtaagaaaattttgtgg
ttagtcgagctgggtaagcaaattttgccagagaactatccgcctgttattcgtcgtttg
gttgatgaggctggctacaaaactactttcaaacgtttgcaaaagcgtcttgcggaagtt
tgtcctgaaaatttggcgattgagttgttggcgagtaagcgtcaattaaatcagttgttt
aaatggtatagaaatgggcaggataggcaaaagttacctgagttattgtgtgggtggaga
gagcaatttggtaataaattattgacagaaattgatctaagtaaataa
DBGET
integrated database retrieval system
