Glaesserella parasuis SH03: JL26_04155
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Entry
JL26_04155 CDS
T03301
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hpas
Glaesserella parasuis SH03
Pathway
hpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL26_04155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpas03019
]
JL26_04155
Enzymes [BR:
hpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JL26_04155
Messenger RNA biogenesis [BR:
hpas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JL26_04155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AIK17042
UniProt:
A0A859IGE0
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All DBs
Position
759367..760587
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AA seq
406 aa
AA seq
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MSKHLTEQRFIDFPIHDSVLAALDSKGFEFCTPIQAKTLPYTLIRQDIAGQAQTGTGKTL
AFLVATFHHLLNHDIPTKHNQPRALILAPTRELAVQIASDASILTQYADLRLALAYGGDG
YDKQLKEIERGVDILIGTTGRVIDYVKQGIIDLDKIQVVVLDEADRMFDLGFIKDIRYLM
RKCPKPEERFTMLFSATLSHRVRELAFEDMHNAEYVEIEPLQRTGHRIKEELFYPSNEDK
MALLLTLMEEEWPDRCIVFANTKHKCEEIWSYLSADGHRVGLLTGDIPQKKRLALLDSFT
QGELDILVATDVAARGLHIPDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACER
YAVNLPAIEEYIGHAIPVSQYDSEVLLALPKPQKAKTRTLQGRKYK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacaccttactgaacaacgttttattgattttccgattcacgacagtgtcttg
gctgctcttgatagcaaaggctttgaattttgtacacccattcaagcgaaaacgttacct
tatacgctgatcagacaagatattgcagggcaagcccaaacaggaacagggaaaaccctt
gcattcctcgttgcgacctttcatcatctattaaatcacgatattccaaccaaacataat
caacctcgtgctttaattcttgcaccaacccgtgaacttgcggtacaaattgcctctgat
gcatcaattttaacgcagtatgcggatctgcgtttagctcttgcctatggtggtgacggc
tacgacaaacagctaaaagagattgagcgtggagttgatattttaatcggcacaacagga
cgggtgattgattatgtcaaacaaggcattattgatctcgataaaattcaagtcgtggtg
ttagatgaagcggatcgaatgttcgatctcggttttatcaaagatattcgctatttaatg
cgaaaatgtccgaaacccgaagagcgtttcacaatgttgttctctgcaacgctctctcat
cgtgtgcgtgaactggcatttgaagatatgcacaatgcagaatatgtggaaattgagcca
ctacaacgcacagggcatcggattaaagaggaactgttctacccttctaatgaagataaa
atggcattacttctaacattaatggaagaagagtggcctgatcgttgcattgtgtttgcc
aatactaaacataaatgcgaagaaatttggagctacctcagtgcagacggacatcgagtt
ggcttgctaacaggcgatataccacagaaaaaacgcttggcattattggatagctttacg
caaggggaattagatattttggtggcaacagatgtagctgctcgaggtttacatattcct
gatgtgacacacgtctttaactatgatttaccagacgaccgtgaggattatgttcaccgt
ataggaagaacaggacgagcaggggaaagtggagtttcgatcagctttgcttgtgaacgt
tatgccgtaaatctaccagccattgaagaatatatcggacacgctatccctgttagtcaa
tacgatagtgaagtgcttttagcgttgccaaagccacaaaaagccaaaacaagaacacta
caaggcaggaaatataaataa
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