Glaesserella parasuis SH03: JL26_04470
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Entry
JL26_04470 CDS
T03301
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hpas
Glaesserella parasuis SH03
Pathway
hpas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JL26_04470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpas03400
]
JL26_04470
Enzymes [BR:
hpas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JL26_04470
DNA repair and recombination proteins [BR:
hpas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JL26_04470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AIK17099
LinkDB
All DBs
Position
833397..834200
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AA seq
267 aa
AA seq
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MKFISFNINGLRARPHQLEALIEKHQPDVIGLQEIKVADEDFPYDLVNHLGYHVFHHGQK
GHYGVALLTKNQPLAVRKGFPTDNADAQKRMIMADLETPFGTLTVLNGYFPQGENRSHET
KFPAKEKFYADLQRYLETELKPENPIIIMGDMNISPTDLDIGIGEVNRKRWLRDGKCSFL
PEEREWLGRLHGYGLVDTFRAMNPTAEGKFSWFDYRSKGFDDNRGLRIDLVLASNPLAER
CVETGIDLEIRAMDKPSDHAPVWAVFK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcatctcttttaatatcaatggcttgcgagcaagaccccaccaactcgaagcg
cttattgaaaaacatcagcccgatgtgatcggcttacaagaaatcaaagtggcagatgaa
gatttcccttacgatttagtcaatcaccttggctatcacgtttttcatcacggacaaaaa
gggcattatggcgttgcacttttaaccaaaaaccaaccgcttgcagtgcgtaaaggtttt
ccaacggacaacgcagatgcacaaaagcgtatgattatggcagatcttgaaaccccattc
ggaacccttaccgtcttaaacggttatttcccacaaggcgaaaaccgtagtcacgaaaca
aaattccctgctaaagaaaaattttatgcggatttacaacgttatttagaaacagaactc
aagcctgaaaacccgattatcattatgggcgatatgaacatcagcccaacagatttagac
atcgggattggcgaagtgaaccgcaaacgctggttgcgtgatggcaaatgttcatttcta
cctgaagaaagagaatggctaggacgtttacatggatacggtttagtcgatactttccga
gcaatgaacccaacggcagaaggcaaattctcgtggtttgactatcgctctaaaggtttt
gatgataaccgtggtttacgcattgacttagtacttgcttcaaaccctttggctgaacgc
tgtgtcgaaacaggcattgacttagaaattcgagcaatggacaaaccttctgaccacgca
cctgtgtgggcggtgtttaagtaa
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