Glaesserella parasuis SH03: JL26_05125
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Entry
JL26_05125 CDS
T03301
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hpas
Glaesserella parasuis SH03
Pathway
hpas03030
DNA replication
hpas03410
Base excision repair
hpas03420
Nucleotide excision repair
hpas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL26_05125
03410 Base excision repair
JL26_05125
03420 Nucleotide excision repair
JL26_05125
03440 Homologous recombination
JL26_05125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpas03032
]
JL26_05125
03400 DNA repair and recombination proteins [BR:
hpas03400
]
JL26_05125
Enzymes [BR:
hpas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL26_05125
DNA replication proteins [BR:
hpas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JL26_05125
DNA repair and recombination proteins [BR:
hpas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JL26_05125
NER (nucleotide excision repair)
GGR (global genome repair) factors
JL26_05125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIK17216
LinkDB
All DBs
Position
complement(973519..976383)
Genome browser
AA seq
954 aa
AA seq
DB search
MATIAQNPLVLVDGSSYLYRAFHAFPPLTNKQGEPTGAMYGVLNMLKSLIAQVEPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDELRSQIQPLHAIIKALGIPLLSIEGVEADDVIGT
LAVQASQAGKHVLISTGDKDMAQLVNDHIMLINTMNNTLLDREGVIEKYGIPPELIIDYL
ALLGDSSDNIPGVKGVGEKTAIALLQGIGSMQAIYANLDKIAELSFRGAKTFAPKLEAEK
ETADLSYLLATIKTDVALDVTYDQLVTQPQQRDQLVELFGRYEFKRWLNEVMNDANPVTQ
TSAEKIPNNYQATQAVSSEQKSAPFVKISIDRTAYDCVNSPELFTKWLAKLQMAQLVAVD
TETDNLDAMQANLVGISFGLENGEACYIPLAHKGKITQSTQVDLFGESEAELDEVEALLP
NQLNKADCLVQLKPILENQNIRKIGQNIKYDLTIFARNGIELQGVAFDTMLQSYTLDSTG
RHNMDNLAERYLGHQTIPFEELAGKGKHQLTFDQIELDKATEYAGEDAEITMKLHQLLWS
ELQKTPELVKLFEQIEMPLVSVLSRVERNGVLIDPAKLLAHSVEIEQRLKELETLVHQEA
GEVFNLASTKQLQEILFNKLGLPILKKTPKGAPSTNEEVLEELAQMGHQVPVLLMEHRGL
SKLKSTYTDKLPQMINAQTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEQGRRIRQAF
IARDGYVILAADYSQIELRIMAHLANDANMIKAFAEGKDIHRSTAAEIFGVPLEAVTSEQ
RRSAKAINFGLIYGMSEFGLANQLGISRTDAKKYMELYFQRYPAVQQFMLDIREKAAEKG
YVETLFGRRLYLPEINSSNQMRRKAAERVAINAPMQGTAADIIKVAMIGIDQAVRNCEDI
AMIMQVHDELVFEVKADRVEHYTQLIKAEMEKAIELKVPLSAEVGVGSNWDEAH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaatcgcacaaaatccgctcgttttagtggacggttcgtcctatttatatcgt
gcattccacgcatttccccctttaactaacaaacaaggtgagccaacaggggcgatgtat
ggggtgctgaatatgttaaaaagcctgattgcacaggttgagccaagccatattgccgtc
gtgtttgatgcgaaagggaaaaccttccgtgatgagctgtttgaacagtataagtctcac
cgtccgccgatgcccgatgaacttcgttcgcagatccaaccgttacacgcaataattaag
gcattgggtattccgctgttgtcgattgaaggggtggaagctgatgatgtaattggaacg
cttgcagtgcaggcttcacaagcaggtaagcacgttttaatcagtacgggcgataaggat
atggctcaattggtgaacgatcatattatgctgattaacacgatgaacaataccttgtta
gatcgtgaaggggtgattgaaaaatatggcattccgcctgagttgattatcgactattta
gccttattgggcgactcgtccgataatattccaggggtaaaaggtgttggtgagaaaacg
gcgattgcgttgttgcaaggtattggctcaatgcaagcgatttatgcaaatttagacaaa
attgcagagttatcatttcgtggggcaaaaacctttgcaccgaaattggaagcagaaaaa
gaaacagccgatctctcttatctgttagcgacaatcaaaaccgatgttgcccttgatgtc
acttacgatcagcttgttactcaaccacaacagcgagatcaactggtagaactctttggt
cgttatgaatttaaacgttggctgaacgaagtgatgaatgacgctaaccctgtgacacaa
acgtcagcagagaaaatcccgaacaattatcaagccacacaagcggtcagttcagaacaa
aaatctgcaccttttgtaaaaatttcgatagatcgcaccgcttacgattgcgtgaacagc
cctgagctgtttaccaaatggctggcaaaattgcaaatggcacagcttgtggcggtggat
accgaaacggataatttagatgcaatgcaagcaaatttagtcgggatttcatttggcttg
gaaaatggcgaagcgtgctacattccgttggcgcataaaggcaaaattacacagtcgacc
caagtggatctgtttggtgaaagtgaagcagaactcgatgaagtcgaagcgttactgcct
aaccagttgaacaaggcggactgtttggtacagttaaaaccgattttagagaaccaaaat
atccgcaaaatcgggcagaatatcaaatacgatttaacaatttttgctcgcaacggcatt
gagctacaaggggttgcctttgatacgatgttgcaatcttacaccctagacagcacaggt
cgtcacaatatggacaatttggcagagcgttatttgggacatcaaactattccttttgaa
gagttggcaggtaagggcaaacatcagcttacattcgatcaaattgaactggataaagca
acagaatatgcaggggaagatgccgaaattacaatgaaattacatcaactcttatggtct
gaactacaaaaaacgcctgaattggtgaaactgtttgagcaaatcgaaatgccgttggtg
agcgtactttcccgtgtggaacgaaacggcgtattaatcgatcctgccaaactgttggca
cattcggtagagattgaacagcgtttaaaagagcttgaaacccttgtacatcaagaagca
ggagaagtgtttaaccttgcttccactaagcaactgcaagagattttatttaacaaactc
ggcttaccgattttaaagaaaaccccgaaaggtgcgccatcaaccaacgaagaagtgttg
gaagaactggctcaaatgggacaccaagtgcctgtgctgttgatggaacatcgtggcttg
agcaagctgaaatcgacctataccgataaactaccgcagatgattaatgcacaaacagga
cgtgtgcatacttcatatcatcaagcggtcacggcaacagggcgactttcatcaagcgat
ccgaatttacaaaatattccgatccgcaacgagcagggcagacgtatccgtcaagccttt
attgcccgtgatggctatgtgattttggcggcggactattcgcaaattgagttacgcata
atggcacatcttgctaatgatgcgaatatgatcaaagcctttgccgaaggtaaagacatt
caccgttctacggcggcggaaatttttggcgtgccgttggaagcggtgaccagtgaacaa
cgccgtagtgccaaggcgattaacttcggcttgatttacggaatgtctgaatttggcttg
gcaaatcaactgggcatttctcgtaccgatgcgaaaaaatatatggaactttacttccag
cgttatccagccgtgcaacagtttatgttagacattcgtgaaaaagccgctgaaaaaggc
tatgttgaaaccctatttggtcgccgtttatatttgcctgaaattaactcaagcaaccaa
atgcgacgcaaagcggcagaacgtgttgccatcaacgccccaatgcaaggcacggcggca
gatattatcaaagtggcaatgatcgggatcgatcaagcggtgcgaaactgcgaagatatt
gcaatgattatgcaagtacacgatgaattagtctttgaagttaaagccgacagagtagag
cattacacccaactgattaaagccgaaatggaaaaagcaattgagcttaaagtaccattg
agtgcggaagttggagttggaagcaattgggatgaggcgcattga
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