Glaesserella parasuis SH03: JL26_05410
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Entry
JL26_05410 CDS
T03301
Name
(GenBank) double-stranded RNA-binding protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hpas
Glaesserella parasuis SH03
Pathway
hpas03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JL26_05410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpas03019
]
JL26_05410
03009 Ribosome biogenesis [BR:
hpas03009
]
JL26_05410
03036 Chromosome and associated proteins [BR:
hpas03036
]
JL26_05410
Enzymes [BR:
hpas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
JL26_05410
Messenger RNA biogenesis [BR:
hpas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JL26_05410
Ribosome biogenesis [BR:
hpas03009
]
Eukaryotic type
90S particles
RNase
JL26_05410
Prokaryotic type
rRNA processing factors
JL26_05410
Chromosome and associated proteins [BR:
hpas03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
JL26_05410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AIK17266
UniProt:
A0A6I5WPR1
LinkDB
All DBs
Position
complement(1028234..1028905)
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AA seq
223 aa
AA seq
DB search
MQLERLQKKLGYQFANLDYLTQALTHRSAASKNNERLEFLGDSILNFAIGKALYEKFPKA
NEGELSRMRAALVKEQTLAVVARQFELGEYMKLGAGELKSGGYRRESILSDCVEAIIAAV
YLDAGIDRAMERVHCWYQQLLNDMQLGEAQKDPKTRLQEYLQGRKLPLPTYEVIDIKGEA
HNQTFKVSCKVEKVDEIFIGNGTSRRKAEQDAALQVIKVLGIK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcaactagaacgattacagaaaaaattaggttatcaatttgctaaccttgattacctc
acccaagccctcactcaccgtagtgctgcttccaaaaataatgaacgccttgagtttctt
ggcgattccatcttaaattttgccattggtaaagccctatatgaaaaattcccaaaagcg
aatgaaggggaattaagccgtatgcgtgcggcattggtgaaagaacagacccttgcggtt
gtcgctcgtcagtttgagttaggcgaatatatgaaattaggggctggagaattaaaaagt
ggtggctatcgccgagagtctattttatccgattgtgtggaagcgattattgccgcggta
tatttagatgctgggattgatcgggcgatggaacgtgtgcattgttggtatcagcaactt
ctaaatgacatgcaactaggggaagcacaaaaagatccgaaaactcgtctgcaagagtat
ctacaagggcgtaagctacccttaccaacttacgaagtgattgatattaaaggcgaagcc
cataatcaaacttttaaagtcagttgtaaagtcgaaaaagttgatgaaatctttatcggt
aacggcacaagccgtcgcaaagccgagcaagatgcggcattgcaggtgataaaggtgttg
ggaataaaatag
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