Glaesserella parasuis SH03: JL26_06990
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Entry
JL26_06990 CDS
T03301
Name
(GenBank) lipid transporter ATP-binding/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hpas
Glaesserella parasuis SH03
Pathway
hpas02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JL26_06990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpas02000
]
JL26_06990
Enzymes [BR:
hpas01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JL26_06990
Transporters [BR:
hpas02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JL26_06990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
DEAD
nSTAND3
AAA_22
G-alpha
AAA_29
AAA_25
AAA_30
Lactamase_B_5
MMR_HSR1
AAA_24
DUF5906
ABC_membrane_2
SLFN-g3_helicase
Zeta_toxin
AAA_15
DUF87
AAA_18
APS_kinase
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
AIK17554
LinkDB
All DBs
Position
complement(1354971..1356719)
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AA seq
582 aa
AA seq
DB search
MTQDHSTWQTFKRLWPMISLFKIGIIVAMVAMIFNAAADAYLITMLKPLIDDGFGVDSDR
NFLKVMAFIVVGLIFARGITSFISAYCLAWVSGKVVMTMRQKVFKHLMFMPVTFFDQNSS
GRLLSRITYDSEQVASSSANALQSVVREGIYIVFLVTTMFYYSWRLSLVLFIIGPVIAVL
IRVVSKRFRKLSRNMQESMGSMTESAEQMLRGHKVVLSFGGQKVEEERFNHTSNDMRRKG
MKMMAASTIADPIIQVIASLALAVVLFVAGSPEIIGDDLTAGEFAAVIGALMGILRPLKT
LTNVNAQFQRGMAASQTLFTLFDLPTEKNEGTYQIERAKGDIRFENVTFTYFGKEQPALK
NISFNLPAGKTLALVGRSGSGKSTIANLITRFYEIDSGNIYLDDHKIQEYTLNNLREQCA
IVSQQVHLFNDTIANNIAYAAKDKYSREQIEAAAKAAYAMEFIEKMSQGLDTVIGENGVS
LSGGQRQRLAIARALLRNSPVLVLDEATSALDTESERAIQAALDELQKDRTVLVIAHRLS
TIENADEILVVDQGEIIERGSHKVLLEKGGAYKQLYQMQFSE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ataactcaagaccactctacttggcagacatttaaacgcctatggcctatgatttccctt
tttaaaatagggattattgtggcaatggtggcaatgatatttaacgctgctgccgatgca
tacttgatcacaatgcttaaacctttgattgatgatggctttggcgttgactctgatcgt
aactttttaaaagtgatggcatttattgtcgtaggcttaatttttgctcgtggtatcacc
agctttatttctgcctactgtttggcgtgggtgtctggtaaagttgtgatgacaatgcgt
caaaaagtatttaagcatttaatgtttatgcctgtaacattttttgaccaaaactcttca
ggaagattactttcccgtattacctatgattctgagcaagtagcaagttcttcggcaaat
gcgttgcaaagcgtggtccgagaagggatctacattgtctttctcgtcacaacaatgttt
tattatagctggcgtttatcccttgttcttttcatcattggtcctgtgattgcggtatta
atccgagttgtgtcaaaacgctttcgtaaactcagccgtaatatgcaagaatctatggga
agcatgaccgaaagtgccgaacagatgttgcgtggacataaagtggtgttatcgtttggc
ggacagaaagtcgaagaagaacgcttcaaccataccagtaacgatatgcgtcgcaaagga
atgaaaatgatggcagcaagtacgattgccgatccgattattcaagtgatcgcttctcta
gccttagcggtggtgctttttgtcgcaggttcgcctgaaattatcggcgatgatttaaca
gctggggaatttgccgcagtgattggggcgttaatgggaattttacgtccattaaaaact
ttaaccaacgttaatgcccagttccaacgaggaatggcggcaagccaaacgctctttacc
ttatttgatttaccaacagaaaaaaatgaaggcacttatcaaattgaacgagccaaaggc
gacattcgttttgaaaacgttacctttacttattttggtaaagaacaacccgctttaaaa
aatatctcgtttaatttacctgcagggaaaaccttagcgttagttgggcgttcaggctca
gggaaatcgaccattgcgaatttgattacccgtttttatgaaattgattcgggcaatatt
tatcttgatgatcataaaattcaagagtacaccttaaacaatttgcgtgaacagtgtgca
attgtttctcaacaggttcatctatttaacgacaccattgcgaataacattgcctatgca
gctaaagacaaatacagtcgtgagcagatcgaagctgcagctaaagccgcttatgcgatg
gaatttatcgaaaaaatgtcacaaggcttggatacagtaattggtgaaaacggggtaagt
ctatctggtggacagcgtcagcgtttggcgattgcccgtgccttattaagaaattcgcct
gttttagtcttagatgaagctacttcagcgttagataccgaatcagaacgtgcaattcaa
gcagcccttgatgaactacaaaaagatcgcactgttttagtgattgctcaccgcttgtct
accattgaaaacgccgatgagattttagtggtggatcagggagagattattgaacgcgga
tcacacaaagtcttgctggaaaaaggtggtgcttataaacagctatatcaaatgcaattt
agtgaataa
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