Glaesserella parasuis SH03: JL26_08930
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Entry
JL26_08930 CDS
T03301
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hpas
Glaesserella parasuis SH03
Pathway
hpas00541
Biosynthesis of various nucleotide sugars
hpas01100
Metabolic pathways
hpas01250
Biosynthesis of nucleotide sugars
Module
hpas_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JL26_08930 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpas01005
]
JL26_08930 (rfaD)
Enzymes [BR:
hpas01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
JL26_08930 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hpas01005
]
Core region
JL26_08930 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
AIK17872
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Position
complement(1742802..1743728)
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AA seq
308 aa
AA seq
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MIIVTGGAGFIGSNIVKALNAIGRTDILVVDNLKNGEKFVNLVDLDIADYCDKEDFIASI
IAGDDFGEIDAIFHEGACSATTEWDGKYLMQNNYEYSKELLHFCLDRQIPFFYASSAATY
GGRSDNFIEERKFEQPLNVYGYSKFLFDEYVRKILPEAESPVCGFKYFNVYGPREQHKGS
MASVAFHLNTQILKGENPKLFEGSETFLRDFVYVEDVAQVNIWAWQNRISGIFNLGTGNA
ESFRAVADAVLAFHQKGQIETIPFPDHLKSRYQTFTQADLTKLRAAGYDKPFKTVAEGTK
AYMEWLNR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaacaggcggtgctggctttatcggtagcaatattgttaaggcgttaaat
gctatcggtagaaccgatattttggtggtggataacctgaaaaatggtgagaagtttgtt
aatttagtcgatttagacattgcagattattgtgataaagaagattttattgcatctatt
attgctggcgatgattttggtgagattgatgcgattttccacgagggggcttgttcagca
acgacggagtgggacggtaaatacttaatgcaaaataactatgagtattctaaagagttg
ttgcatttctgtttagatcgccaaattcctttcttttatgcgtcaagtgcggcgacctac
ggcggtcgttcggacaactttattgaagagagaaaatttgaacagccgttaaatgtttat
ggctattctaaatttttgtttgatgaatatgtgcgtaaaattttgcctgaggcagagtcg
ccagtgtgtggctttaagtatttcaatgtgtatggtccacgcgaacagcataaaggctcg
atggcaagtgtggcgttccatttgaatacgcaaattcttaaaggcgaaaatccgaaacta
tttgaaggttcggaaacatttttgcgtgattttgtgtatgtggaagatgtcgctcaggtg
aatatttgggcgtggcaaaataggatttcgggtattttcaatctgggtacaggcaatgcg
gagtctttccgtgccgttgctgatgcggtgttggcgttccatcaaaaagggcaaattgaa
actattccattcccagatcatttaaaatctcgttaccaaacctttactcaagctgattta
accaaactgcgtgcggcaggttatgataagccgtttaaaaccgttgcagaagggactaag
gcttatatggagtggttgaatagataa
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