Glaesserella parasuis SH03: JL26_09450
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Entry
JL26_09450 CDS
T03301
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hpas
Glaesserella parasuis SH03
Pathway
hpas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JL26_09450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpas03400
]
JL26_09450
DNA repair and recombination proteins [BR:
hpas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JL26_09450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AIK17963
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Position
complement(1857233..1859830)
Genome browser
AA seq
865 aa
AA seq
DB search
MKNQNNFLQHTPMMAQYLQLKAQNPDILLFYRMGDFYELFYDDAKKAAALLDISLTKRGQ
SAGEPIPMAGVPYHAVEGYLAKLVALGESVAICEQIGDPATSKGPVERKVVRIITPGTVS
DEALLPERQDNLVAAIYQEKGVFALATLDMASGRFLISELPNKEALSAELQRTQPAEILY
PEDFSDVGILQGYKGLRRRPVWEFELVTAIQLLNRQFGTQNLTGFGVEKAVVALCAAGCV
LHYAQETQRTALPHINSIHLAQNSDTVLLDSATRRNLELTTNLAGGTENTLTSVLDKCVT
SMGSRLLKRWIHQPIRDLAKLHTRQQTILALQKNERIEPLQPLLQQVGDMERILARVALR
TARPRDLTRLRTALEHIPDIVKHSQHQTACLDNTLQQIADFSELFELLNQAIIDNPPQLI
RDGGVIAEGYNAELDEWRSLAEGATKFLEDLEARERAKTGIDTLKIGFNAVHGYYIQISQ
GQAHKAPIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFELIIPRL
GELQLASFVLAELDVLTNLAERAESLNYVMPSFSHQRGVNIKGGRHPVVEQVLKTPFIAN
PVLLNPQRHLLIVTGPNMGGKSTYMRQIALITLMAYIGSFVPADSAEIGPIDRIFTRIGA
SDDLASGRSTFMVEMTEMANILHQSSENSLVLVDEIGRGTSTYDGLSLAWACAEWLAKKT
QSLTLFATHYFELTSLPNQLKGVANIHLDALEHNDTIAFMHSVQEGAASKSYGLAVAALA
GVPKQVIQLAKQKLTQLERLSQQTAQLDANQQQDLLFSANLQNAEPISPLIEPSKVEQAL
AEIDPDELTPKQALEMLYRLKLLIK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcaaaataatttcctacagcacacgccaatgatggctcaatatctccaactc
aaagcacaaaatcccgatattcttctgttctatcgtatgggcgatttttatgagttattt
tacgacgatgccaaaaaagcggctgcgttgttagatatttctctgactaaacgtgggcaa
tcagcaggtgaaccaattccaatggctggggtaccgtatcacgctgttgaaggttatttg
gcgaagttggtggcgttgggtgagagtgtggcgatttgtgagcaaatcggcgatcctgca
accagtaaaggccctgttgagcgtaaagtcgtacgaattatcacacctggaacggtcagc
gacgaagcgttgctaccagaacgccaagacaatttggtcgccgcaatttatcaagaaaaa
ggcgttttcgcccttgcgacattagatatggcttctgggcgttttttgattagcgaatta
cctaacaaagaggcactgtctgctgagttacaacgcacccaacctgccgagattttgtat
cctgaagatttttctgatgtaggtattttacagggttacaaaggcttacgccgccgacct
gtttgggaatttgagctagttacagccattcagttgcttaatcgccaatttgggacacaa
aatcttacaggttttggagtagaaaaggcggtggttgccttgtgtgcggctggttgtgtc
ttgcattatgctcaagaaactcaacgcaccgcactgccacatatcaacagcattcatttg
gctcaaaatagcgatactgtcttacttgattcggcaactcgcagaaatttggaattaacc
accaatctggcaggcggtacagaaaacacacttacatcggttttggataaatgcgtcacc
tcaatggggagtcgtttactcaaacgttggatccatcaacctattcgtgatttagccaaa
ctgcatactcgccagcaaactattttggcattgcaaaaaaatgaacgtatcgaaccgctt
cagcccttgctacaacaagtaggcgatatggaacggattttggctcgcgttgcattacgc
actgctcgccctcgtgacctaacccgtttacgcacagctttagagcatattcccgatatt
gtaaaacattcacaacatcagaccgcttgtttagacaatactttgcagcagatcgccgat
tttagcgagctattcgagctattaaaccaagcaatcattgataacccaccgcaacttatc
cgtgacggtggcgttatcgccgaaggctacaatgctgagttggacgaatggcgaagtttg
gcagaaggggcaaccaaattccttgaagatttagaagcgagagaacgagccaaaacaggc
attgatacccttaaaatcggattcaatgcggtacacggctactatatccaaatcagtcaa
ggacaggctcacaaagctccgatccactatgtccgccgtcaaacgttaaagaatgcggaa
cgttacattattcctgagctgaaaacctatgaagataaggtattgaaagcgaaaggggca
tctcttgcccttgaaaaacagctttatgacgaactgtttgaactgataataccacgtttg
ggtgaattgcagttggcaagctttgtgttagcagaacttgatgtgctgaccaaccttgcc
gaacgtgccgaaagtttgaattatgtaatgccaagtttcagccatcagcgaggcgtgaat
atcaaaggcggtcgccaccctgttgttgaacaagtactgaaaacaccgtttatcgccaac
cctgtactgctcaatccacaacgccatttgctgatcgtcacaggtccgaatatgggcggt
aaaagtacctatatgcgacaaattgccttgattactttaatggcatatatcggcagtttt
gtgcctgcggacagtgcagaaatcggaccgattgaccgtatttttacccgtatcggtgct
tctgatgatttagcttcagggcgttcaacctttatggtggaaatgaccgaaatggcgaac
attctgcaccaatccagcgaaaacagccttgttcttgttgatgaaatcgggcgaggcacc
tcgacctacgatggcttatcactcgcttgggcgtgtgccgaatggttagcgaagaaaacc
caatcgctcaccctatttgccacccactactttgagctaaccagcttaccaaaccagctc
aaaggcgttgccaatatccatttagatgcgttggaacataacgacactatcgcctttatg
cacagcgtacaagaaggggcagcaagtaaaagttatggtttagccgttgccgccctagca
ggcgtaccaaagcaggtgatccaacttgcgaaacagaaactcacacagcttgaacgactt
tcgcaacaaacggcacaattagacgcaaatcaacagcaagatttactcttttcggcgaat
ttgcaaaatgctgaaccaatctcaccgcttatcgaaccgtccaaagtcgaacaagccctc
gcagagattgatcccgatgaactcacaccgaaacaggcgttggagatgttgtatcggttg
aagttacttataaaataa
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