Glaesserella parasuis SH03: JL26_11500
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Entry
JL26_11500 CDS
T03301
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hpas
Glaesserella parasuis SH03
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpas03021
]
JL26_11500
Transcription machinery [BR:
hpas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
JL26_11500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
PDZ_2
HrpB7
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AIK18304
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All DBs
Position
2247636..2250542
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AA seq
968 aa
AA seq
DB search
MSFVVGQRWISESENNLGLGIVTAVDNRTVTLSFPASDEQRVYAVAVAPLTRVQFQKGDR
VTSIDGWQLDIEDVVENQGVALYLGKRVDTQVESVLPEMQLDHKVSFSKPQDRLFSAQID
RSDRFALRYRALKHQQAQFQSELRGMRGIRASLIPHQLHIAKEVGQRLAPRVLLADEVGL
GKTIEAGMILQQQLFSGRVDRVLVLVPESLQHQWLVEMLRRFSLNFSLFDEERCADFTKK
DEDNNDISENPFETEALVIASIDWLSANPQRAKQVLDTDWDMLIVDEAHHLEWDEQNPSM
AYQFVAQLSKQISAVLLLTATPEQLGQESHFARLALLDPDRFYDYQAFVEEQKQYQPVAD
AVATLLNDKPLSAKEQESISELLAEEDVEPMFRIINSDASEEQSREVRQELISELIDRHG
TSRVLFRNTRQGVKGFPHRIYNEIVLEMPTQYANALKVMCMMGGNKMEDLLYPERLFQRM
NPNAKWHEFDPRIEWLITFLKNHRDEKILVICKQADTAIQLEQVLREKEAIRSAVFHEKM
SIVERDKASAYFAQQEDGAQVLISSSIGSEGRNFQFARRLVLFNLPDNPDLLEQSIGRLD
RIGQKHDIEIYVPCFNHSTQLILAEWYHRGLNAFEETCPMGATLFREFNAELTAYLLNPE
RSEAFEAFVEQTHKRQQQLKVELEKGRDRLLELNSNGGETAQQLAQAIAEQDDNPQLVSF
ALNLFDVIGLEQEDLGEKSIVISPTGHMLVPDFPGLSEEGNTVTFDRELALMREDVLFLT
WDHPMIRNGIDLITSADIGKCAVSLLVNKNLPAGTLLLEAIYIVEAQAPKDLQLTRFLPP
TPVRILLDNKGNDMASQVSFAGLEKQLKPVNKQMANKIAKMARGDIEKLIAFSDEKVVPQ
AQSLIEQAKQNADHTLGTELHRLTSLQAVNKNIRADEIQVLEQLREASLKHLDQANWRLD
SLRVIVSS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
ttgagctttgtagtcggacaacgttggattagtgagtcggaaaataacttaggattaggc
attgtcactgcagtggataaccgcactgtgaccctttcatttcctgcatcggacgaacaa
cgtgtgtacgctgttgccgttgcccctttaacccgtgtgcaattccaaaaaggcgatcgt
gttaccagtattgatggctggcagttagatattgaagatgtcgttgaaaatcaaggggtt
gcactctatttaggtaaacgtgtcgatactcaagtagagagcgttctgcctgaaatgcaa
ctcgatcataaagtgagttttagtaaaccgcaggatcgtctattctctgcccaaattgat
cgcagtgatcgtttcgccctgcgttatcgtgctttgaagcatcaacaagcccagtttcaa
tctgaactgcgtggaatgcgtggtattcgtgcaagcctaattccccatcaattacatatt
gccaaagaagtcgggcaacgtcttgctccccgtgtgttacttgcagatgaagtggggttg
ggtaaaaccattgaagcaggtatgattttgcaacaacagcttttctccggacgagtagat
cgtgtattggtgcttgtgccggaaagtttacagcatcaatggctggttgaaatgcttcgt
cgttttagcctgaatttttcgctgtttgatgaggaacgttgtgccgatttcactaagaaa
gatgaagataataacgacatcagtgaaaatccgtttgaaacggaagccttagtgattgcc
tctatcgattggttatcggcaaatccacagcgtgcaaaacaagtgcttgataccgattgg
gatatgttgattgttgatgaagctcaccatttggaatgggacgagcaaaatccaagtatg
gcatatcagtttgtcgcacagctctccaagcagatttcagcagtcttgttactcacggcg
acccctgagcaattaggacaagagagccattttgctcgtttagccttgctagatcctgac
cgtttctacgattatcaagcctttgtggaagagcaaaaacagtatcagccagtcgccgat
gcggtcgctaccttgcttaacgataagccgttaagtgccaaagagcaggaaagtatcagc
gaattgctggcggaagaagatgttgagccgatgttccgtattattaattcggatgctagc
gaagaacagagtcgggaagtccgccaagagttaattagtgagttaattgaccgacacgga
acaagccgtgtgctattccgcaatactcgccaaggcgtaaaaggcttcccacatcgtatt
tacaatgaaattgtgttggaaatgcctacacaatatgcaaatgctttgaaagtaatgtgt
atgatggggggaaataagatggaagatctgctctaccctgaacgcctattccaacgcatg
aacccaaatgcgaagtggcacgagtttgatccacgcattgagtggttaattacattcttg
aaaaatcatcgtgatgaaaaaattctggtgatttgtaagcaagcggataccgccattcag
ctagaacaagtgttgcgtgaaaaagaagctattcgctctgcggtgttccacgaaaaaatg
tcgattgtggaacgagataaagcgtcggcttactttgctcaacaagaagatggcgcgcag
gttctgattagttcaagtatcggttcagaaggtcgaaacttccagtttgcacgccgttta
gtactgtttaatttgcctgataatccagacttactcgagcagagtatcgggcgtttagac
cgtatcgggcaaaaacacgatattgaaatctatgtgccttgtttcaatcactccacccag
ttgatcttggcggaatggtatcatcgtggcttaaatgcctttgaagaaacttgtccgatg
ggggcaacgttatttagagaatttaatgcggaactcaccgcttacctactcaatcctgaa
cgtagcgaagccttcgaagcctttgtggaacaaacccataaacgccaacaacagcttaaa
gtggaattagaaaaagggcgagatcgtctgttagaactcaactcgaacggcggtgaaact
gctcaacaattagctcaagctattgctgaacaagacgacaatccgcagttggtcagtttt
gccttaaatctatttgatgtgattggtctagagcaggaagatttaggcgagaaaagcatt
gtgattagcccgacaggacatatgcttgtgcctgatttcccagggttgtctgaagaaggc
aacacagtgacttttgatcgtgaacttgccctaatgcgagaagatgtgttgttcttaacg
tgggatcaccctatgatccgcaacggtattgatcttattacgtccgccgatattggtaag
tgtgctgtttcattactcgtcaataaaaacttgccggcaggcacattactgcttgaagcg
atctatatcgtagaagcccaagcaccaaaagatttacagctcacccgtttcctaccgcca
acgcctgtgcgtatcttgctggataacaaaggcaacgatatggcatcgcaggtgtcgttt
gcagggttggaaaaacagctcaagccggtcaataaacagatggcaaataaaattgcgaag
atggctcgtggtgatattgagaagctgatcgcattcagtgatgaaaaagttgtgccacag
gcacaatccttaattgaacaagcaaaacagaatgcggatcacactttaggtacagaatta
caccgcttgacatcactacaagcagtgaataaaaacattcgtgctgatgaaattcaagtc
ctagagcagttgcgagaagcatcactgaaacatctagaccaagcaaattggcgattggat
agcttgagggtgattgtgagtagttaa
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