Glaesserella parasuis ZJ0906: K756_01725
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Entry
K756_01725 CDS
T02697
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hpaz
Glaesserella parasuis ZJ0906
Pathway
hpaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K756_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpaz03400
]
K756_01725
Enzymes [BR:
hpaz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K756_01725
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K756_01725
DNA repair and recombination proteins [BR:
hpaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K756_01725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn-ribbon_8
zf-ACC
Motif
Other DBs
NCBI-GeneID:
16165353
NCBI-ProteinID:
AGO15611
UniProt:
A0A806J9Z6
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All DBs
Position
321277..322101
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETSMRGISPYLVGQKIKEIIVRQPKLRWAVSSELSTMQGATIIEIYRRAKYLI
IQTDKGDILVHLGMSGSLGILSVKENKAIDKHDHIDLITENGVILRYNDPRKFGTWLWAE
QAETAELLANLGPEPLSEAFTSGYLFEKSRNKTVAVKNFIMNNAIVVGVGNIYACESLFM
AGIHPELAAQNLTAKQCERLVTVIKEVLTKAIIQGGTTLKDFIQPDGKPGYFAQVLQVYG
RKGEECNDCGSIIEAKVIGQRNSFYCPKCQRLPK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacccgaagtcgaaacaagtatgagaggcatctcgccttaccttgtaggg
cagaagatcaaagagattattgttcgtcagccgaaattacgttgggctgtgagttcagag
ctttcaactatgcaaggggcgacgataattgagatttaccgccgagctaagtatttaatt
attcagacagataagggcgatattttagttcatttaggaatgtcgggatcgttgggtatt
ttatcggtcaaagagaataaggcgatagataagcacgatcatatcgatctcatcacagaa
aacggcgtaatcttacgttataacgacccacgaaaatttggaacctggctttgggcagag
caagctgaaacagcagagttattagcaaatttagggccagagcctctttcagaagccttt
acaagcggttatttatttgaaaaaagtcgcaataaaacggttgctgtgaaaaacttcatt
atgaataacgctatcgttgttggtgtgggcaacatctatgcttgcgaatcactttttatg
gctggaatccaccccgaattagccgcacaaaatctaaccgcgaaacagtgtgagagatta
gtcactgtgattaaagaggttttgacaaaagcgattatccaagggggaacgaccttgaaa
gattttattcagcctgacggaaaacctggatatttcgcccaagtattacaagtctatggt
cgcaaaggcgaggaatgtaacgattgtggctctattattgaagctaaggtaatcgggcaa
cgaaatagtttctattgtccaaagtgtcagagattaccgaagtaa
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