Glaesserella parasuis ZJ0906: K756_03275
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Entry
K756_03275 CDS
T02697
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hpaz
Glaesserella parasuis ZJ0906
Brite
KEGG Orthology (KO) [BR:
hpaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpaz03016
]
K756_03275
Enzymes [BR:
hpaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
K756_03275
Transfer RNA biogenesis [BR:
hpaz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K756_03275
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
Motif
Other DBs
NCBI-GeneID:
16165667
NCBI-ProteinID:
AGO15888
UniProt:
A0A806J8P3
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Position
complement(616746..618725)
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AA seq
659 aa
AA seq
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MFQNNPLLAQLKQQIEASKEYVEGVVKTSDKSYGFLECEKNSYFIPPVEMKKVMHGDKVK
AVVKRDGDKEQVEIDSLLEPMLERFIAQVRFNKDGKLQLAVDHPSINNFIPANTQKKVTE
TLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKADDNFAPWWVTLARHEQPREPVANEKS
YELQDQVEREDLTHLYFTTIDSASTKDMDDALYVEPISENGTQTGWRLVVAIADPTAYIP
EQSAIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGYIETDLSGNVVG
EARFVSAWVQSKARLVYDEVSDYLEKVENHWTPDYAETAQQIDWLYQFTLARIDWRSKNA
LLFKEQGDYSFELAEDGAVKAIHIEYRRIANQMIEEAMIIANICAAQFLDKYAHTGVFNT
HSGFDSKNLEPARKFLLDTLSNDENRESLSERYSPERLSTLEGYCEMRRDIEQFPENFLE
MRLRRYLTFAEFKATSAPHLGLGISHYATWTSPIRKYGDMVNHRLIKQVLANQTAKPVEE
TVLTRLQEARKQNRMVERDIADWLYARYLAPMVEQNVEFDGEIQDVSRGGLRVKVIENGA
SVFVPFSTLHNNKEEMIFSSEEIALYIKGEKAYQIGQAVKVKLKEVRVETRSVVGDVLI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaaataaccccctattagctcaattaaaacaacagattgaagcaagcaaagaa
tatgttgaaggcgttgtgaaaacgtcagataaaagttatggctttttagaatgtgagaaa
aatagctatttcattccccctgtggaaatgaaaaaagtgatgcacggcgataaggtcaaa
gctgttgtgaagcgtgatggcgataaagagcaagttgaaattgactcgttattagagcca
atgttagaacgttttatcgctcaagtgcgttttaacaaagacgggaaattgcaattagcc
gttgatcacccaagtatcaataactttattccagccaatacgcagaaaaaagtcacagaa
acccttgaaaatggcgactgggtggtggcacagttgaaaacacaccctcttcgtgatgat
cgctttttctttgctcaagtcacgcaatttatctgtaaagcggacgataatttcgcgccg
tggtgggtaactttagctcgccacgaacagcctcgtgaacctgttgcgaatgagaaaagc
tatgaattacaggatcaagttgagcgcgaagatctaactcacctctattttactaccatt
gacagtgccagcactaaagatatggacgatgcgttatacgttgaaccaattagcgagaac
ggcacgcaaacaggctggcgtttagtcgttgcgattgccgatccgaccgcttacattcct
gagcagtctgcaattgaaaaagccgctcgccaacgctgtttcaccaactatcttcctggt
tttaacattccgatgttgccacgagagctgtccgatgatctttgctctctcgtgccgaat
gaaaaacgcccagcattagtcggctatattgaaacagatttaagcggcaatgtggtaggt
gaagctcgctttgtgtcagcttgggttcaatctaaagctcgtttggtctatgacgaagtg
tctgattatctcgaaaaagtcgaaaatcactggacaccagactatgcagaaaccgcacag
caaatcgactggttgtatcaatttacccttgctcgtatcgactggcgtagcaaaaatgca
ttgctatttaaagagcaaggcgattacagctttgagttagctgaagacggcgcagtcaaa
gcaattcacattgaatatcgccgtatcgctaaccaaatgatcgaagaggcaatgattatt
gccaacatctgtgccgcacagtttttagataaatatgcacatacaggcgtatttaatacc
cactcaggttttgatagtaaaaacctagagcctgctcgcaaattcttactggatacgctt
tccaatgatgaaaatagagagagtttatctgaacgctactcccctgagcgtttaagtacc
cttgaaggctattgcgaaatgcgtcgtgatattgagcaattccctgaaaatttcttagaa
atgcggttacgtcgctatttaacttttgctgaatttaaagcaacctcagcaccacattta
ggcttaggcatcagtcattatgcaacttggacatcgccaattcgtaaatacggcgatatg
gtcaatcatcgtttaattaaacaagtccttgcaaatcaaacagcaaaacctgtcgaagaa
accgttttaactcgcttacaggaagctcgtaagcaaaatcgtatggttgaacgtgatatt
gccgactggctctatgcccgttatcttgcgccaatggtagaacaaaacgtagaatttgac
ggcgaaattcaagatgtttctcgtggtggcttgcgtgttaaagtcattgagaatggagct
tcggtttttgttccattctcaactctacataataacaaagaagaaatgatcttctcttca
gaggaaatcgctctttacatcaaaggcgaaaaagcttaccaaatcgggcaagcggtgaaa
gtgaagctcaaagaggttcgtgtagaaacaagatcggttgtgggtgacgttttaatctaa
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