Glaesserella parasuis ZJ0906: K756_03535
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Entry
K756_03535 CDS
T02697
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hpaz
Glaesserella parasuis ZJ0906
Pathway
hpaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K756_03535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpaz03019
]
K756_03535
03016 Transfer RNA biogenesis [BR:
hpaz03016
]
K756_03535
Enzymes [BR:
hpaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K756_03535
Messenger RNA biogenesis [BR:
hpaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K756_03535
Transfer RNA biogenesis [BR:
hpaz03016
]
Prokaryotic type
tRNA degradation factors
K756_03535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
aRib
S1_2
KH_SLS1_2
SporV_AA
Motif
Other DBs
NCBI-GeneID:
16167244
NCBI-ProteinID:
AGO15928
UniProt:
A0A806J8T1
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All DBs
Position
671782..673911
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AA seq
709 aa
AA seq
DB search
MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKEVNEGQDFFPLTV
DYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPVRPLFPEGFFNEIQVIATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFIDNQFVLNPTTSEQRLSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVFGHEQQKVVIENIKEFVKEAGKPRWDWVAPEPNTD
LINKVKALAEVRLGDAYRITEKQARYEQIDAIKADVIAQLTAEDETISSGKIVDIITALE
SQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLGTERD
AQIIDELTGEKSDRFLFHYNFPPYSVGETGRIGSPKRREIGHGRLAKRGVLAVMPTAEEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEEKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMRIALNQAKGARMYILGVMEQAI
PAPRSEISDFAPRIHTMKIDPKKIKDVIGKGGATIRALTEETGTSIDIDDDGTVKIAATD
NNAAKRVMERIEEIVAEVEVNAIYKGKVTRVVDFGAFVSILGGKEGLVHISQITDARVER
VADYLSVGQEVQVKVVEIDRQGRIRLTMKDLNGDATAREVVEEIQELAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgactccaatcgttaaacaatttaaatacggtcagcataccgtaactttagaaacaggg
gctattgctcgtcaagcaacagcagcagtaatggcaagtatggacgatacgacggttttt
gttaccgttgtggcaaaaaaagaggtgaatgaaggccaagacttcttcccattaactgta
gattatcaagagcgtacttacgcagcaggccgcattccaggtggtttcttcaaacgtgaa
ggtcgtccatctgagggtgaaactttaattgctcgtttaatcgaccgcccggttcgccca
cttttccctgaaggtttcttcaacgaaattcaagtgattgcaacggtggtttctgtcaat
ccacaaatcagcccggatttagtggcgatgatcggtgcttcagcagcattatctctatcc
ggcgtgcctttcaacggcccaatcggtgcagcacgtgttggttttattgataaccaattc
gtcctaaacccaactacatcagaacagcgtttaagccgtttagatttagtggtagctggt
acagacaaagcggtattaatggttgaatctgaagcagatattttaactgaagaacagatg
ttagcggcagtggtattcggtcacgagcaacaaaaagttgtgattgaaaacatcaaagaa
tttgtgaaagaagccggtaaaccacgttgggactgggttgctccagagccaaatacggat
ttaatcaataaagttaaagcattagcagaagttcgtcttggcgatgcttaccgtatcact
gaaaaacaagcacgttatgaacaaattgacgcaatcaaagcggacgttatcgctcaatta
actgcagaagatgaaaccatttcaagcggcaagattgtagatattattaccgcattagaa
agccaaatcgtgcgtagccgtattatcgcaggcgaaccacgcattgacggtcgtacagtg
gataccgtgcgtgcattagatatttgcacaggcgttttacctcgtacgcacggttcagcg
ttgtttactcgcggtgaaacacaagcattagcggttgcgacattagggacagagcgtgat
gcacaaattattgacgaattaacaggcgaaaaatcagatcgcttcttattccactacaac
ttccctccatattcagtaggtgaaacaggtcgtatcggttcgccgaaacgtcgtgaaatc
ggtcacggtcgtttagcgaaacgtggcgtgttagcagtaatgccaacggcagaagagttc
ccatatgttgtgcgtgtggtttctgaaattaccgagtcaaacggttcttcatcaatggct
tctgtatgtggtgcttctcttgcgttaatggacgcaggtgtaccaatcaaagcggctgtt
gctggtatcgcaatgggcttagtgaaagaagaagagaaatttgtggtactttcagacatt
ttaggtgatgaagaccacttaggtgatatggactttaaagtagcaggtactcgtgaaggt
gtaactgcattacaaatggacatcaaaattgaagggatcacccctgaaattatgcgtatc
gcattaaatcaagcaaaaggtgcgcgtatgtacattttaggcgtaatggaacaagcgatc
cctgcaccacgttcagaaatttctgacttcgcacctcgtattcatacaatgaagatcgat
ccgaagaaaatcaaagatgtgatcggtaaaggtggtgcgacaattcgtgcattaaccgaa
gaaaccggcacgtcaattgacattgatgatgacggaacagtgaaaattgcggcaacagac
aacaacgccgcgaaacgtgtgatggaacgtatcgaagagatcgttgcagaagttgaagtc
aatgcgatctacaaaggtaaagtaacccgtgtggttgatttcggtgcattcgtgtctatc
cttggtggtaaagaaggtttagtgcatatttctcaaatcactgacgctcgtgtagaacgt
gttgcggattacttatctgttggtcaagaagttcaggtgaaagtggtagaaatcgatcgt
caaggtcgtatccgcttaacaatgaaagatctgaatggtgatgcaactgctagggaagtt
gttgaagaaattcaagaattagcagaataa
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