KEGG   Glaesserella parasuis ZJ0906: K756_04565
Entry
K756_04565        CDS       T02697                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
hpaz  Glaesserella parasuis ZJ0906
Brite
KEGG Orthology (KO) [BR:hpaz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpaz03016]
    K756_04565
Enzymes [BR:hpaz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     K756_04565
Transfer RNA biogenesis [BR:hpaz03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    K756_04565
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC COG6_N
Other DBs
NCBI-GeneID: 16166884
NCBI-ProteinID: AGO16122
UniProt: A0A806JDG9
LinkDB
Position
complement(833159..834286)
AA seq 375 aa
MNKYIEYQWVDDNPSLAQMCLQVAEQSVIALDTEFVRTRTYYPKLGLIQLFDGKQVYLID
PLSITDFSPFTALLANENVLKVLHACGEDLEVFQHYFKQLPQPMLDTQVMAGFVGLGISI
GFAKLALHYLEVELDKGASRTDWLSHPLSEIQLQYACADVWYLLPIYHKLAEDLAKTPWQ
TAVVEECATLLAKRQIVEDPNKVYKEISNAWQLNQQELAILQILAKWRIEEAEKRDLALN
FIIKEQSLLQIAKLQPKHTSILLEFMHPNEVRIHGKKILWLVEQGKQILPENYPPVIRRL
VDEAGYKTTFKRLQKRLTEVCPENLAIELLASKRQLNQLFKWYRNGQDRQKLPELLCGWR
EQFGNKLLPEIDLSK
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgaataagtatatagaatatcagtgggttgatgataatcctagtttggctcagatgtgt
ctgcaggttgcagaacaatcggtgattgcattagatactgagtttgttcgtactcgaact
tattatccgaagttggggttaattcagctttttgatggtaagcaggtgtatttgattgat
ccgttaagtattacggatttttccccttttacggcgttgttagcaaatgaaaatgtgctt
aaggtgcttcacgcttgtggtgaagatttggaggtttttcaacactatttcaaacagtta
ccacaaccaatgttagatacacaggtaatggctgggtttgtaggtttaggtatttcaatt
ggctttgccaaacttgcgttgcattatcttgaggttgaattggataaaggggcttcccgt
acagactggttgagccatcctttgagtgagatacaacttcaatatgcctgtgcagatgtg
tggtatttgttgccgatttatcacaaattggcggaagatttggcaaaaacaccgtggcaa
actgctgtcgtagaggagtgtgcaaccttgttagctaaacggcagatcgtagaagatccg
aataaagtctataaggagatcagtaatgcgtggcaacttaaccaacaagagctggcaatt
ttgcagatattagctaagtggcggatagaagaagcagaaaaacgtgatttggcattaaat
tttattattaaagagcagagtttgttacaaattgctaaattacaaccgaaacatacttca
atattgttggaatttatgcacccaaatgaagtgcgtattcacggtaagaaaattttgtgg
ttagtcgagcagggtaagcaaattttgccagagaactatccgcctgttattcgtcgtttg
gttgatgaggctggctacaaaactactttcaaacgcttgcaaaagcgtcttacagaagtt
tgtcctgaaaatttggcgattgagttgttggcgagtaagcgtcaattaaatcagttgttt
aaatggtatagaaatgggcaggataggcaaaagttacctgagttattgtgtgggtggaga
gagcaattcggtaacaaattattgccagaaattgatctaagtaaataa

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