Helicobacter pylori B38: HELPY_0040
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Entry
HELPY_0040 CDS
T00950
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase (GDP-D-mannose dehydratase)
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb00051
Fructose and mannose metabolism
hpb00541
Biosynthesis of various nucleotide sugars
hpb01100
Metabolic pathways
hpb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
HELPY_0040 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HELPY_0040 (gmd)
Enzymes [BR:
hpb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
HELPY_0040 (gmd)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
DUF5126
TPR_3
DUF1454
Motif
Other DBs
NCBI-ProteinID:
CAX28597
UniProt:
C7BXL2
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All DBs
Position
41824..42969
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AA seq
381 aa
AA seq
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MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSDHKRRF
FLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMR
ILGLEKKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLF
AVNGILFNHESRVRGETFVTRKITRAASTIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMH
LMLQAPTPQDYVIATGKTTSVRDFVKMSFEFIGINLEFQNTGIKEIGLIKSVDEKRANAL
QLNLSHLKTGQIVVRIDEHYFRPTEVDLLLGDPTKAEKELGWVREYDLKELVKDMLEYDL
KECQKNLYLQDGGYILRNFYE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaaatcgctttaatcaccggggttaccgggcaagacgggagctatctggct
gaatacttgctgaatttgggctatgaagtgcatgggttaaaaaggcgttcttctagcatc
aacacttctaggatcgatcatttgtatgaagatttgcacagcgatcacaaaaggcgtttt
ttcttgcattatggggatatgaccgatagctctaacctcatccatttaatcgccaccact
aagcccacagagatttataatttagccgctcaaagccatgtgaaagtctcttttgaaacc
ccagaatacaccgctaacgctgatggtattggcacgctaaggattttagaagccatgcgg
attttaggcttagaaaagaaaacacgattctatcaagccagcacgagcgaattgtatggc
gaagtcttagaaaccccacaaaatgaaaacaccccctttaacccacgaagcccctatgcg
gtcgctaaaatgtatgccttttacatcaccaaaaattacagagaggcctataacttgttt
gcggttaatggcattctttttaatcatgagagcagggtaaggggcgaaacttttgtcact
cgtaaaatcacacgagccgctagcacgatagcgtataacttaacggattgcttgtattta
gggaatttggacgctaaaagagactgggggcatgccaaagattatgtgaaaatgatgcat
ttaatgctccaagcgcccactccacaagattatgtgatcgctacagggaagaccacaagc
gtgcgcgattttgtgaaaatgagctttgaatttatcggtatcaatttagaatttcaaaat
acagggattaaagaaatcggtttgattaaaagcgttgatgaaaaaagagcgaacgcttta
caattaaacttaagccatttaaaaacaggccaaatcgtggtgcgcatagacgagcactat
tttaggcctactgaagtggatttgcttttaggcgatcccactaaggcagaaaaagagcta
ggctgggttagggaatacgatttaaaagagttggttaaggacatgttagaatacgattta
aaagaatgccagaaaaacctttacttgcaagatgggggttatattttaaggaatttttat
gaatga
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