Helicobacter pylori B38: HELPY_0187
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Entry
HELPY_0187 CDS
T00950
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase (Serine methylase) (SHMT)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb00260
Glycine, serine and threonine metabolism
hpb00460
Cyanoamino acid metabolism
hpb00630
Glyoxylate and dicarboxylate metabolism
hpb00670
One carbon pool by folate
hpb00680
Methane metabolism
hpb01100
Metabolic pathways
hpb01110
Biosynthesis of secondary metabolites
hpb01120
Microbial metabolism in diverse environments
hpb01200
Carbon metabolism
hpb01230
Biosynthesis of amino acids
hpb01240
Biosynthesis of cofactors
hpb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HELPY_0187 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HELPY_0187 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HELPY_0187 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HELPY_0187 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HELPY_0187 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HELPY_0187 (glyA)
Enzymes [BR:
hpb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HELPY_0187 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CAX28732
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All DBs
Position
180269..181519
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AA seq
416 aa
AA seq
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MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFPSVMEAMGSILTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEVLKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVADEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALKEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaatgagcatttagaaatgatagcgagcgagaactacacttttcctagtgtt
atggaagctatgggaagcattttaacgaataaatacgctgagggctatcctaacaagcgc
tattatggaggctgtgaagtggtggataaaatagaaagcctggccatagaaagggctaaa
aagctttttaattgccagttcgctaacgtgcaagcgcattcaggctcacaagctaataac
gctgtttatcacgctcttttaaagccttatgacaagattttaggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttggatggctatattgattatgaagaagtgctaaaaatcgctcag
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggggcgttgctattaggcgatatagcccat
gtggcggggcttgtggtcgctgatgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaactaatgat
gaagagatagcggctaagattgataaagcgatttttccagggactcaaggcgggcctttg
atgcatgcgattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaaa
gcttacgcacaattagtgaaatctaacatgcaagttttggctaaagcgttaaaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggatttcttagat
aagccttatagcgggaaagacgctgatattgcattaggaaatgccggaatcaccgtgaat
aaaaacaccattcctggcgaaacgcgcagcccctttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaagaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaggccatggctagtcaattccctgtgtaccaacaacccattttttaa
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