Helicobacter pylori B38: HELPY_0519
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Entry
HELPY_0519 CDS
T00950
Symbol
hup
Name
(GenBank) Histone-like DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
hpb
Helicobacter pylori B38
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpb03032
]
HELPY_0519 (hup)
03036 Chromosome and associated proteins [BR:
hpb03036
]
HELPY_0519 (hup)
03400 DNA repair and recombination proteins [BR:
hpb03400
]
HELPY_0519 (hup)
DNA replication proteins [BR:
hpb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HELPY_0519 (hup)
Chromosome and associated proteins [BR:
hpb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HELPY_0519 (hup)
DNA repair and recombination proteins [BR:
hpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HELPY_0519 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-CCDC81_euk_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAX29058
UniProt:
C7BZ56
LinkDB
All DBs
Position
complement(512571..512855)
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AA seq
94 aa
AA seq
DB search
MNKAEFIDLVKEAGKYSSKREAEEAISAFTLAVETALSKGESVELIGFGKFETAEQKGKE
GKVPGSDKTYKTEDKRVPKFKPGKILKQKVEEGK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcggaatttattgatttggttaaagaagcgggtaaatacagcagcaaaaga
gaagctgaagaagcgatcagtgcctttactctagcggtagagacagctttaagcaagggt
gagagcgtggagttgattggttttggcaaatttgaaaccgcagagcaaaaaggcaaagag
ggtaaagtgccaggaagcgataaaacttataaaaccgaagacaaacgagtacctaaattc
aaacccggcaaaatccttaaacaaaaagttgaagaaggcaagtga
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