Helicobacter pylori B38: HELPY_0633
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Entry
HELPY_0633 CDS
T00950
Name
(GenBank) Conserved hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hpb
Helicobacter pylori B38
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpb03009
]
HELPY_0633
Enzymes [BR:
hpb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HELPY_0633
Ribosome biogenesis [BR:
hpb03009
]
Prokaryotic type
ribosomal protein modification factors
HELPY_0633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
DUF2981
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
CAX29166
LinkDB
All DBs
Position
612260..613579
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AA seq
439 aa
AA seq
DB search
MQVKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDAKKADVILINTCGFIESAKQES
IQTILNAAKDKKEGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDILIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVE
DLALKGYKDMTFIAQDSSSFLYDKGQKDGLIQLIKAIDKQQALKSARILYLYPSSTTLEL
IGTIEDSLIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLDAMKQVKESFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNHSFKALLNKPIKALVENKEGAYFYKARDLRWAPEVDGEILINDSELTTPLKPGHYT
IVPSVFKDNILLAKVLSPF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttaaagaaaacaaacaactttgcctgatctcattaggttgctctaaaaacctg
gtggattcagaagtgatgttaggcaagctttataactacacgctcactaatgacgctaaa
aaagccgatgtgattttgatcaacacttgcgggtttattgaaagcgccaaacaagagagt
atccaaaccattctcaacgccgccaaagacaaaaaagagggagcgattttgattgcgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagagttgatccctgaagtggatatt
tttaccggcgtgggggattatgacaagattgatattttgatcgctaaaaaacaaaaccag
ttcagcgagcaagtgtttttaagcgagcattataacgcgcgcattatcacgggatcgagc
gtgcatgcttatgtgaaaatttctgagggttgcaatcaaaaatgctctttttgcgctatc
cctagctttaaggggaaattgcaaagcagggaattagactccattttaaaagaagtggag
gatctagcccttaaaggctataaggatatgacttttatcgctcaagactccagctcattt
ttatacgataaggggcaaaaagacggcttgatccagctgattaaggcgattgacaaacaa
caagccttaaagagcgcgcgtattttatacctctatccctctagcaccactttagagttg
attggcacgattgaagactcgcttatttttcaaaattattttgacatgcccatccagcat
atcagcgactccatgctcaaaaagatgcggcgcaactccagccaagcgcaccatttaaag
cttttagatgccatgaagcaggttaaagaaagctttataagaagcacgattattgtaggg
catccggaagaaaatgagggcgaatttgaagaattgagcgcgtttttagacgagttccgg
tttgacagattgaatatttttgctttcagcgctgaagaaaacacgcatgcctattcttta
gagaaagtgcctaaaaaaatcatcaacgctcgcatcaaagccttgaataaaatcgcttta
aaacaccaaaaccattcttttaaggctttattgaataagcccattaaggcgttagtggaa
aataaagagggtgcgtatttttacaaagcaagggatctcaggtgggcgcctgaagtggat
ggggaaattttaatcaatgatagcgaactaaccacccctttaaaacccgggcattacacg
attgtgcctagtgtgtttaaagacaatatcttactcgctaaggttttaagccctttttaa
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