Helicobacter pylori B38: HELPY_0811
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Entry
HELPY_0811 CDS
T00950
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase (DAP epimerase)
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb00300
Lysine biosynthesis
hpb00470
D-Amino acid metabolism
hpb01100
Metabolic pathways
hpb01110
Biosynthesis of secondary metabolites
hpb01120
Microbial metabolism in diverse environments
hpb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HELPY_0811 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HELPY_0811 (dapF)
Enzymes [BR:
hpb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HELPY_0811 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CAX29338
LinkDB
All DBs
Position
804458..805276
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AA seq
272 aa
AA seq
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MVFYKYSGSGNDFLIVQSFKKKDFSNLAQQVCHRHEGFGADGLVVVLPSKDYDYEWDFYN
SDGSKAGMCGNASRCVGLFAYQHAIAPKEHVFLAGKREISIRIEEPNIIESNLGNYKILD
TIPALRCKKFFSSDSVLENIPMFYLIDTGVPHLVGFVKNKRLLNSLNTLELRALRHEFNA
NINVAFIENKETIFLQTYERGVEDFTLACGTGMAAVFIAARIFYNTPKKATLIPKSNESL
ELSLKNDGIFYKGAVRYIGMSILGSVFENGCF
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttacaaatattcagggagcgggaatgattttttaatcgttcaaagtttcaaa
aaaaaagatttttccaatttagcccaacaggtgtgccataggcatgagggttttggggct
gatgggcttgtagttgtcttaccgagtaaggattatgactacgaatgggatttttacaat
tcagacggctctaaagctggcatgtgcgggaatgcgagccgttgcgtggggttatttgcc
taccaacatgctatagcccctaaagagcatgtttttttagccggaaaaagagagatttct
atccgtatagaagaacccaatatcatagagagcaatcttggtaactacaaaatcctagac
accatacccgccttaagatgcaaaaaatttttttcaagcgacagcgttctagaaaatatc
cctatgttctacctcatagatacaggagtgccgcatttagtgggatttgtgaaaaataaa
aggttattaaattcccttaacacgctggaattaagggctttaaggcatgagtttaacgct
aatattaacgtcgcttttatagaaaataaagagacgatttttttacaaacttatgaaaga
ggggttgaagatttcacgctagcttgtgggacaggcatggcggcggtttttatcgccgcg
cgcattttttataacacgcccaaaaaagccactctcatccctaaaagcaacgaatcttta
gagctttctttaaaaaatgatgggattttttataagggcgcggtgcgttatattggcatg
agtattttgggcagtgtttttgaaaatgggtgtttttga
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