| Entry |
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| Symbol |
gyrB
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| Name |
(GenBank) DNA gyrase subunit B (type II topoisomerase)
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| KO |
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| Organism |
hpb Helicobacter pylori B38
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| Brite |
KEGG Orthology (KO) [BR:hpb00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:hpb03032]
HELPY_0851 (gyrB)
03400 DNA repair and recombination proteins [BR:hpb03400]
HELPY_0851 (gyrB)
Enzymes [BR:hpb01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HELPY_0851 (gyrB)
DNA replication proteins [BR:hpb03032]
Prokaryotic type
DNA Topoisomerases
HELPY_0851 (gyrB)
DNA repair and recombination proteins [BR:hpb03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HELPY_0851 (gyrB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(838067..840388)
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| AA seq |
773 aa
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESMAGFCDAINIT
LTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLHETYFYEDGLKQFVKDSAKKELLTPIIS
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDNN
IKTKESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYALLELEKRYNLLEILRF
LIETKDALSLDMKVLEKSILEKLEGLNYQILRSFATEESLHLHAQTPKGLVEFNLDDNLF
KEVLFEEAHYTYQKLMEYNLDFLENKDILAFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAVFSLCMGDEVEPRRAFIQAHAKDVKQLDV |
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| NT seq |
2322 nt +upstreamnt +downstreamnt
atgcaaaattaccagagccatagtatcaaggttttaaaaggcttagagggggttaggaaa
cgccctggaatgtatattggcgataccaatgtgggtgggttgcaccacatggtgtatgaa
gtcgtagataacgccgtagatgagagcatggcgggtttttgcgatgcgattaatatcact
ttgactgatgagggttcatgcatcgtagaagataacgggcgaggcattcctgtagatatt
caccccacggaaaaaatccccgcttgcaccgtggttctaacgattttgcatgcggggggc
aagtttgataatgatacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgctttgagcaaacgcttgattatgaccattaaaaaagagggtcaaatctatcgc
caagagtttgaaaaaggtatccccattagcgagcttgaaatcattggcaaaaccaaaagc
gctaaagaaagcggtacgactattgaatttttccctgatgaaagcgtgatggaggttgtt
gaatttcaagcgggtattttgcaaaaacgcttcaaagaaatggcgtatcttaatgatggc
ttaaaaatttctttcaaagaagaaaaaacccaactgcatgagacttatttctatgaagac
ggcttgaaacaattcgttaaagacagcgctaaaaaagaattgctcacccccattatttcg
tttaaaagcatggatgaagaaacgcgcacttctatagaagtcgctttagcgtatgctgat
gattacaatgaaaacaccttaagctttgtgaataacattaaaacttctgagggtggcacg
catgaggcgggctttaaaatgggcttgtctaaagcgattttacaatacattgacaataac
attaaaactaaagagtcgcgccccatttctgaagacattaaagagggcttgatcgctgtt
gtgagcttgaaaatgagcgagccgttatttgaagggcagactaaatccaaactcggcagt
tcgtatgcacgcgcgttggtttcaaaattagtctatgataaaatccatcaatttttagaa
gaaaaccctaacgaagccaaaatcattgccaataaagccctactagctgcaaaagccaga
gaagcgagtaagaaagccagagagcttacaaggaaaaaagacaatttgagtgtcggcacc
ttgcctggaaaattagccgattgccagagcaaagaccctttagagagtgaaatcttttta
gtggagggcgatagcgcgggagggagcgctaaacaagggcgcgatagggtttttcaagcg
attttgcccttaaaaggtaagattttaaatgtggaaaaaagccatttgtcaaaaatccta
aaatcagaagaaattaaaaacatgatcacggcttttgggtgcggcattcaagagagtttt
gatatagaaagattgcgctatcataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgctgatgacttttttctatcgttatttacgcccgctgattgaa
caagggcatgtttatatcgctcaagcccctctttataaatacaagaagggcaagacagaa
atctatcttaaagacagcgtcgctttggatcattttttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaatttgttaaaagtggcgcgccat
taccgctacgcgcttttggaattagaaaaacgctacaacttgctagagattttacgcttt
ttgattgagactaaggacgccttaagccttgatatgaaagttttagaaaaaagcattttg
gaaaaattagagggcttgaattatcagatcttacgctcttttgccactgaagaaagcttg
catttgcacgcgcaaacccctaagggcttggtggaatttaacctagatgacaacctcttt
aaagaagtgttgtttgaagaagcacattacacttaccaaaaacttatggaatataattta
gatttcttagaaaataaggatattttggcgtttttagaagaagtggaaaatcacgctaaa
aagggagcgaatatccagcgctataagggattgggcgagatgaaccctaatgatttgtgg
gaaacgaccatgcataaagaaaaccgcagcttaatcaaactcaaaattgaagatttagaa
aaaaccgatgcagtcttttcgctttgcatgggcgatgaagtagagcctagaagagccttt
atccaagcgcatgctaaagacgtgaaacaactagatgtgtaa |
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