Helicobacter pylori B38: HELPY_0859
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Entry
HELPY_0859 CDS
T00950
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme)
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb00470
D-Amino acid metabolism
hpb00550
Peptidoglycan biosynthesis
hpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HELPY_0859 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HELPY_0859 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpb01011
]
HELPY_0859 (murD)
Enzymes [BR:
hpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HELPY_0859 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpb01011
]
Precursor biosynthesis
Amino acid ligase
HELPY_0859 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF3531
Motif
Other DBs
NCBI-ProteinID:
CAX29386
UniProt:
C7C000
LinkDB
All DBs
Position
complement(846209..847477)
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AA seq
422 aa
AA seq
DB search
MKISLLGHGKTTLALARFFKKNHNEVKFFDDQFSSFHKDREGFLCYPSKDFNPNDSQLEV
VSPGISFTNPLVMKAKHLVSEYDYIDSLFDSVFTPTIISISGTNGKTTTTEMLTMLLEDF
KAVSGGNIGTPLIELFEKQSPLWVLETSSFSLHYTNKAYPLIYLLINVKADHLTWHCNFE
NYLDAKLKVLSLMPKTSLAILPLKFKEHPIIQNSQVQKIFFDKSEEVLECLKIPSNALFF
KGAFLLDAALALLVYEQFLKIKNLKWQDYKENALKRLNAFKIGSHKMEEFRDKQGRLWVD
DSKATNIDATLQALKTFKNQKIHLILGGDIKGVNLTPLFEEFKNYKISLYAIGSSAFIIQ
ALALEFNISCRVCLKLEKAVQEIKSVLLQNEIALLSPSAASLDQFSSYKERGEKFKAFVL
KD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctctttattggggcatggcaaaaccactctagccctagcgcgtttttttaaa
aaaaaccataacgaagtcaaattttttgatgatcaattctcttcatttcataaggataga
gagggttttctttgctatcctagtaaggattttaaccctaatgattcccaactagaggta
gtcagtccgggcattagtttcacgaaccctttagtcatgaaagccaagcatttagtgagc
gaatacgattatattgatagcttgtttgattctgttttcacgcccactataataagtatt
agcggcactaacgggaaaaccaccacgacagaaatgctcaccatgcttttagaagatttt
aaggctgtgagtggggggaatatcggcacgcccttgattgaattgtttgaaaagcaatcg
cccttgtgggtgctagaaacaagctccttttctttgcattacactaataaggcttaccct
ttaatctacttgctcatcaatgtcaaagccgatcatttgacttggcattgcaattttgaa
aattatttggacgctaaactcaaggttttatcgttgatgcctaaaacttcgctcgctatc
ctccctttaaaattcaaagaacaccccattattcaaaactcgcaagtgcaaaaaatcttt
tttgacaaaagcgaagaggttttagagtgtttaaaaatcccttctaacgccctttttttt
aagggagcgtttttattagacgctgctttagctcttttggtttatgaacaatttttaaaa
ataaagaatttaaaatggcaagattataaagaaaacgcccttaaaagactgaacgctttt
aaaatcggctcgcataaaatggaagaatttagggataaacaagggcgtttgtgggtagat
gacagcaaagccacgaatattgatgccaccttacaagccctaaaaacctttaaaaaccaa
aaaatccatttgattttagggggcgatattaaaggggtcaatttaacccccctttttgaa
gaatttaaaaactataaaataagcctttatgccataggatcaagcgcttttattatccaa
gccttagcgttagaatttaatatttcttgtcgggtttgtttaaagttagaaaaagcggtt
caagaaattaaaagcgttttattgcaaaatgaaatcgctttgctttcacccagcgcggcc
agtttggatcaattctcttcgtataaagaaaggggtgaaaaattcaaggcgtttgtttta
aaagactaa
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