Helicobacter pylori B38: HELPY_0897
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Entry
HELPY_0897 CDS
T00950
Symbol
hopC
Name
(GenBank) Outer membrane porin and adhesin HopC; putative signal peptide
KO
K15843
outer membrane protein HopC/AlpA
Organism
hpb
Helicobacter pylori B38
Pathway
hpb05120
Epithelial cell signaling in Helicobacter pylori infection
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05120 Epithelial cell signaling in Helicobacter pylori infection
HELPY_0897 (hopC)
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Gene cluster
GFIT
Motif
Pfam:
HP_OMP
Motif
Other DBs
NCBI-ProteinID:
CAX29422
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All DBs
Position
887654..889207
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AA seq
517 aa
AA seq
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MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKADELARELNADV
TNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPTKLNSNDVSANALLSGAVGSGTCAAAG
TAGGTSLNTQSACTAAGYYWLPSLTDRILSTIGSQTNYGTNTNFPNMQQQLTYLNAGNVF
FNAMNKALEKNGTTTASGTNGATGSDGQTYSQQAIQYLQGQQNILNNAANLLKQDELLLE
AFNSAVAANIGNKEFNSAAFTGLVQGIIDQSQAVYNELTKNTISGSAVNNAGINSNQANA
VQGRASQLPNALYNAQVTLDKINALNNQVRSMPYLPQFRAGNSRATNILNGFYTKIGYKQ
FFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVGTDVLYNIFSRSYQNRSVDMG
FFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTV
EFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaaaaatagaacgctgtttcttagtctagccctttgtgctagcataagttat
gccgaagatgatggagggtttttcaccgtcggttatcagctcgggcaagtcatgcaagat
gtccaaaacccaggcggcgctaaggccgacgaactcgccagagagcttaacgctgatgta
acgaacaacattttaaacaacaacaccggaggcaatgtcgcaggggcgttgagtaacgct
ttctcccaatacctttattcgcttttaggggcgtatcccacgaaactcaatagtaacgat
gtgtctgcgaacgctcttttaagtggtgcggtaggcagtgggacttgtgcggctgcaggg
acggctggtggcacatctcttaacactcaaagcgcttgcaccgctgcgggctattactgg
ctccctagcttgactgacaggattttaagcacgatcggcagccagactaactacggcacg
aacaccaatttccccaacatgcaacaacagctcacctacttgaatgcggggaatgtgttt
tttaacgcgatgaataaggctttagagaagaatggaaccactactgctagtggaactaat
ggtgcgactggttcagatggtcaaacttactctcaacaagctatccaataccttcaaggc
caacaaaatatcttaaataacgcagcgaatttgctcaagcaagatgaattgctcttagaa
gctttcaactctgccgtagccgccaacattgggaataaggaattcaattcagccgctttt
acaggtttggtgcaaggcattattgatcaatctcaagcggtttataacgaactcactaaa
aacaccattagcgggagcgcggttaataacgctgggataaactccaaccaagctaacgct
gtgcaagggcgtgctagtcagctccctaacgctctttataacgcgcaagtaactttggat
aaaatcaatgcgctcaacaatcaagtgagaagcatgccttacttgcctcaattcagagcc
ggtaacagccgtgcgacgaatattttaaacgggttttacaccaaaataggttataagcaa
ttcttcgggaagaaaaggaatatcggtttgcgctattatggtttcttttcttataacgga
gcgagcgtgggctttagatccactcaaaataatgtagggttatacacttatggggtgggg
actgatgtgttgtataacatctttagccgctcctatcaaaaccgctctgtggatatgggc
ttttttagcggtatccaattagccggtgagaccttccaatccacgctcagagatgacccc
aatgtgaaattgcatgggaaaatcaataacacgcacttccagttcctctttgacttcggt
atgaggatgaacttcggtaagttggacgggaaatccaaccgccacaaccagcacacggtg
gaatttggcgtagtggtgcctacgatttataacacttattacaaatcagcagggactacc
gtgaagtatttccgtccttatagcgtttattggtcttatgggtattcattctaa
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