Helicobacter pylori B38: HELPY_1223
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Entry
HELPY_1223 CDS
T00950
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb03030
DNA replication
hpb03430
Mismatch repair
hpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HELPY_1223 (holA)
03430 Mismatch repair
HELPY_1223 (holA)
03440 Homologous recombination
HELPY_1223 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpb03032
]
HELPY_1223 (holA)
03400 DNA repair and recombination proteins [BR:
hpb03400
]
HELPY_1223 (holA)
Enzymes [BR:
hpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HELPY_1223 (holA)
DNA replication proteins [BR:
hpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HELPY_1223 (holA)
DNA repair and recombination proteins [BR:
hpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HELPY_1223 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DUF1877
Motif
Other DBs
NCBI-ProteinID:
CAX29933
UniProt:
C7C0F2
LinkDB
All DBs
Position
complement(1227058..1228080)
Genome browser
AA seq
340 aa
AA seq
DB search
MYRKDLDHYLKQRLPKAVFLYGEFDFFIHYYIQTISALFKCNNPDTEISLFYASDYEKSQ
ITTLLEQDSLFGGSSLVVLKLDFALHKKFKENDTNLFLKALERPSHNRLIIGLYNAKSDT
TKYKYTSDTIVKFFQKSPLKDEAICTRFFIPKTWESLKFLQERANFLHLDISGHLLNALF
EINNEDLGISFNDLDKLAVLNTPITLEDIQELSSNAGDMDLQKLILGLFLKKSTLDIYDY
LLKEGKKDADILRGLERYFYQLFLFFAHIKTTGLMDAKEVLGYAPPKEIVENYAKNALRL
KEAGYKRVFEIFRLWHIQSMQGQKELGFLYLTSIQKIINP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtaaagatttggaccattatttaaaacaacgactccctaaagcggtgtttttg
tatggggagtttgatttttttatccattattatattcaaacgattagcgcgctttttaaa
tgcaataaccctgacacagaaatttcgcttttttatgcgagcgattatgaaaaaagccag
attacgactcttttagagcaggattctttatttggagggagcagtttagtcgttttaaaa
ctggattttgcgctgcataagaaatttaaggaaaatgataccaatctttttttaaaagct
ttagagcggcctagccataacaggcttatcatagggctttataatgctaaaagcgacacc
accaaatacaaatacactagcgatactatcgttaaatttttccaaaaaagccccttgaaa
gatgaagcgatctgcacgcgcttttttatccctaaaacttgggagagtttgaaattcttg
caagaaagggctaattttttgcatttagacatcagcggccatcttttaaacgctcttttt
gaaattaataacgaagatttaggcatttcatttaacgatttagacaagctagcggtttta
aatacgcccatcactttagaagacattcaagaattaagctccaatgcgggggatatggat
ttacaaaagctcattttagggctttttttgaaaaaaagcacgcttgatatttatgattat
ttgttaaaagagggcaaaaaggatgcggatattttaagggggttagagcggtatttttac
cagctttttttatttttcgcccacattaaaacgaccggtttaatggacgctaaagaggtt
ttaggctacgctccccctaaagaaattgtggaaaattacgctaaaaacgccttgcgtttg
aaagaagccggctataagagggtttttgaaatttttaggttatggcacattcaaagcatg
caagggcaaaaggaattgggctttttgtatttgacctccattcaaaaaatcattaacccc
taa
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