Helicobacter pylori B38: HELPY_1270
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Entry
HELPY_1270 CDS
T00950
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain (RNAP alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HELPY_1270 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpb03021
]
HELPY_1270 (rpoA)
03400 DNA repair and recombination proteins [BR:
hpb03400
]
HELPY_1270 (rpoA)
Enzymes [BR:
hpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HELPY_1270 (rpoA)
Transcription machinery [BR:
hpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HELPY_1270 (rpoA)
DNA repair and recombination proteins [BR:
hpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HELPY_1270 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
CAX29978
LinkDB
All DBs
Position
complement(1271690..1272724)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSDHIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKKVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSSEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
catcctattagaaggcttttgcttttaagctctgtggggtatgctcctgtgggtttaaag
attgaaggcgtccatcatgagtttgactctttaaggggggttactgaagatgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagccaaggcgttagtggggcaggatagc
tctttggaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgaattctgatcatatagaaatcgtcaatccggaaatgcccctagcgaca
atcaacgaagacgctcaattgaatttttcgctcattatctataaaggaatggggtatgtc
ccaagcgaaaatacaagggaattgatgcctgagggctacatgccactagacggctctttc
acgccgattaaaaaggtcgtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ctatcagcggtgaaagtgatgagcaagcaactaggcgtttttggcgaaagacccattgct
aacacggagtattcaggcgattacgctcaaagagatgacgctaaagacttgagcgctaag
attgaaagcatgaatttgagcgccaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactcgtgttgatgagcgaagaagagcttaagggcgtgaaaaacatgggc
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagctctgaacaaagagaaagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga
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