Helicobacter pylori B38: HELPY_1422
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Entry
HELPY_1422 CDS
T00950
Symbol
thdF
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hpb
Helicobacter pylori B38
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpb03016
]
HELPY_1422 (thdF)
Transfer RNA biogenesis [BR:
hpb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HELPY_1422 (thdF)
Prokaryotic type
Methyltransferases
HELPY_1422 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
ABC_tran
Ras
Arf
ATP_bind_1
AAA_29
MMR_HSR1_Xtn
URGCP
ATP-synt_ab_N
Roc
Motif
Other DBs
NCBI-ProteinID:
CAX30126
LinkDB
All DBs
Position
1403103..1404455
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AA seq
450 aa
AA seq
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MNDTIAAIATPLGKGAISIIKISGHNALNILKQLTQKQDFTPRYAYVHDIFSDGVLLDKA
LVIYFKAPYSFTGEDVCEIQCHGSPILAQNILQACLNLGARLAKAGEFSKKAFLNHKMDL
SEIEASVQLILCEDESVLNALARQLKGELKIFIEEARDNLLKLLASSEVLIDYSEEDIPS
EFLKEVSLNLEKQIASFKDLLDFSNTQKQRNKGHALSIVGKPNAGKSSLLNAMLLEERAL
VSDIKGTTRDTIEEVIELKGHKVRLIDTAGIRESTDKIERLGIEKSLKSLENCDIILGVF
DLSKPLEKEDFTIIDALNRAKKPCIVVLNKNDLAPKLELEILKSHLKIPYTLLETNTLNS
KACLKDLSQKISEFFPKLDTQNKLLLTSLAQTTALENAIIELQNAKNHLETLELFSYHIL
SAIENLNLLTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccatcgccgctatcgctacccctttaggcaagggagcgattagcatcatt
aaaatcagtggccataacgctctaaacatcctcaaacaactcacccaaaaacaagacttc
acccccagatacgcttatgtgcacgatattttttctgatggcgttttattggacaaagcg
ttagtgatttatttcaaagccccttatagtttcactggtgaagatgtgtgcgaaatccaa
tgccatggaagccccattttagcgcaaaatatcttacaagcttgtttgaatttaggggct
aggcttgctaaagcgggggaatttagcaaaaaagcctttttaaaccataaaatggatttg
agcgagattgaagcgagcgttcagctcatcctttgtgaagatgaaagcgttttaaacgct
ctagccaggcagcttaagggcgagttaaaaatttttattgaagaagctagagataatctt
ttaaagcttttggcgagttcagaagttttgattgattatagcgaagaagacattcctagc
gaatttttaaaggaagtgtctcttaatttagaaaaacaaatcgcctcttttaaagattta
ttggatttttctaatacgcaaaaacaaaggaataaggggcatgccttaagcattgttggc
aaacccaatgccggcaaaagctccctattaaacgccatgcttttagaagaaagggcttta
gtgagcgatattaaaggcacaacaagagacaccatagaagaagtcattgaactaaaaggg
cataaggtgcgcttaattgacaccgctggcattagagagagcacggataaaatagagcgc
ttagggattgaaaaaagccttaaaagtttagaaaattgcgacattattttgggcgtgttc
gatctttctaaacccctagagaaagaagattttactatcattgacgcccttaatcgcgct
aaaaagccttgcattgttgttttgaataaaaacgatttagcccccaaactggagcttgaa
atcttaaaatcccatcttaaaatcccttatactttactagaaactaacaccctaaattcc
aaggcttgtttgaaagatttgagccaaaaaatcagtgagtttttccccaaactagacacc
caaaacaagctcttgctcacttccctagcccaaacaaccgccctagaaaacgccattatt
gaattgcaaaacgctaaaaaccatttagaaactttagagcttttttcttatcacatttta
agcgcgatagaaaacttaaacttgctcactcgcccttatgaaaccagccaaatgcttgat
agcatgttcagcgaattttgcttaggcaaatga
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