Helicobacter pylori B38: HELPY_1453
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Entry
HELPY_1453 CDS
T00950
Symbol
serS
Name
(GenBank) Seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS)
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HELPY_1453 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpb01007
]
HELPY_1453 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpb03016
]
HELPY_1453 (serS)
Enzymes [BR:
hpb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HELPY_1453 (serS)
Amino acid related enzymes [BR:
hpb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HELPY_1453 (serS)
Transfer RNA biogenesis [BR:
hpb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HELPY_1453 (serS)
Prokaryotic type
HELPY_1453 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
SCO1-SenC
Surfac_D-trimer
DUF4795
DUF1664
Motif
Other DBs
NCBI-ProteinID:
CAX30156
LinkDB
All DBs
Position
complement(1436841..1438088)
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AA seq
415 aa
AA seq
DB search
MIDRRLLLQDFDRVALSLKKRNNAMDDTLERLREVITRYKKRLIELEGLQAFQNKVSKEF
GIKMAQKADASDLKKELENNKIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGASEE
DNIEIKKILTPRVFTFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIH
LMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY
NDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPTESDAMQE
HMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQ
ARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgattgatagaagacttttattgcaagattttgacagggtggctctttctttaaaaaag
cgtaataatgcgatggatgatacattggagcgtttgcgcgaagtcatcacgcgttataaa
aagcgactcattgaattagaaggcttgcaagcctttcaaaacaaggtttctaaagaattt
ggcatcaaaatggctcaaaaagcggatgcaagcgatctcaaaaaagagctagaaaataat
aaaatcaaactgaatgagctttccaaaagcgtgggcgaattggagcaacaaatagattta
aagctttccataatccctaatctggtggatgaaaaaacccctttaggcgcaagcgaagaa
gacaatatagagattaaaaaaatcttaaccccaagggttttcactttcaaacccaaagag
cattttgaactcgctcaacaaaatggctggattgattttgaaagcggcgtgaaactcgcc
aaaagccgtttttctgtcatcaggggttttggggctaaaatttatcgcgcgctcattcat
ttgatgttggattttaatgaaaaaaatggctttgaaatcatttacacgccggcgttagtg
aatgaaaaaatgctttttgggaccgggcaattacccaaattcaaagaagacgtttttaaa
atagaaaatgaaaatttgtatttgatccccaccgctgaggtaacgctcactaatctatac
aacgacaccattattagcgttgaaaacctccccattaaaatgaccgcgcacacgccttgt
ttcaggagcgaagcagggagcgctggcaaggacacaagggggatgataagacagcaccaa
tttgataaagtagaattggtggctatcacgcaccctacagaaagcgatgcgatgcaagag
catatgctagagagcgcgagcgaaattttaaaggctttggaattgccgcaccggttcgtg
caattgtgcagtggggatttaggctttagcgcgagcaacacgatagacattgaagtgtgg
ctgcccgggcaaaattgctacagagaaatcagctccgtgtctaacacgagggattttcaa
gccaggcgtgccaaaatccgcttcaaagaaaatcaaaaaaaccaattagcacacacctta
aacggctcttctttagcggtaggcaggacgatggtcgctttaatggaaaaccaccagcaa
gcggatgggagcatccacattcctaaggcgttagaaaaatacctttaa
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