KEGG   Helicobacter pylori B38: HELPY_1478
Entry
HELPY_1478        CDS       T00950                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
hpb  Helicobacter pylori B38
Pathway
hpb00740  Riboflavin metabolism
hpb01100  Metabolic pathways
hpb01110  Biosynthesis of secondary metabolites
hpb01240  Biosynthesis of cofactors
hpb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hpb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    HELPY_1478 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HELPY_1478 (ribD)
Enzymes [BR:hpb01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     HELPY_1478 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     HELPY_1478 (ribD)
SSDB
Motif
Pfam: dCMP_cyt_deam_1 RibD_C
Other DBs
NCBI-ProteinID: CAX30181
LinkDB
Position
complement(1460525..1461559)
AA seq 344 aa
MRLYESLLEICLNKAWEHQTLALENPSVACMVLDKNHEILSLETHKKAKTSHAEVLAAKS
ALKILRPHLKNDLEKLEDPKILSDFLKTRHDNAFTDCVFLITLEPCNSYGKTPACSELLE
ILKPKRVVIATEENEAKKGGLARLQKACIETIICRNLENKAKDLLLPFRIMEQKGRFNLF
KLALRMNGDYHHGKITGPKSVIFTHNQRAICDTLIISGKTIRTDNPLLDARFCDSFYQHK
NPNIAILSKRSIDPHSKVFSAPNRLVNTFHDPKDLPLEKGFNFIEGGWGLFESLRDKIDA
LLLHSHASMIGKAFNTLALKTPFKGRLLHVQILENEALLWIENS
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgagactttatgaaagtttattagaaatttgcttgaataaggcgtgggagcatcaaacc
ctagccttagaaaacccaagcgtggcttgcatggtgctagataaaaaccatgagatcttg
agtttagaaacccataaaaaagccaaaacctcgcatgcagaagtcttagccgccaaatca
gcactaaagattttacgcccccatttaaaaaacgatttagaaaaattagaagatcctaaa
attttaagcgattttttaaaaacgcgccacgataacgcttttacagactgcgttttttta
atcaccctagagccatgcaattcttatggcaaaaccccggcttgtagcgaattgttagaa
attttaaagcctaaaagagtggtcattgccacagaagaaaacgaagctaaaaaagggggt
ttagcaaggctacaaaaggcttgtattgaaacaataatttgtcgcaatttagaaaacaag
gctaaggacttgctcttgccttttaggataatggaacaaaaggggcgttttaatttgttc
aaactcgctttaagaatgaatggggattaccatcatggcaagatcaccgggccaaaaagc
gttattttcacgcacaaccaacgagcaatatgcgacactctcatcatttctgggaaaacc
ataagaacggacaaccccttattagacgctcgcttttgcgacagcttttatcaacataaa
aaccccaatatcgctattttatccaagcgttcaattgaccctcattcaaaagttttttct
gcgcctaatcgtttggttaacactttccatgaccccaaagatttacccctagagaagggg
tttaatttcattgaaggggggtggggattgtttgagagcttgagggataaaatagacgcg
ttgcttttgcattcgcatgcgtctatgattggcaaagcgtttaacacgctcgctctaaaa
accccttttaaagggcggttgttgcatgtgcaaatcttagaaaatgaagcccttttatgg
atagaaaactcttaa

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