Helicobacter pylori B38: HELPY_1559
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Entry
HELPY_1559 CDS
T00950
Symbol
pbp3
Name
(GenBank) Penicillin-binding protein 3
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb00550
Peptidoglycan biosynthesis
hpb01100
Metabolic pathways
hpb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HELPY_1559 (pbp3)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HELPY_1559 (pbp3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpb01011
]
HELPY_1559 (pbp3)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hpb03036
]
HELPY_1559 (pbp3)
Enzymes [BR:
hpb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HELPY_1559 (pbp3)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HELPY_1559 (pbp3)
Chromosome and associated proteins [BR:
hpb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HELPY_1559 (pbp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF5663
Motif
Other DBs
NCBI-ProteinID:
CAX30260
LinkDB
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Position
complement(1548514..1550361)
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AA seq
615 aa
AA seq
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MDKNNIDSHSNPERFLETQRDKGSVTALIFLLLFIIFLMVAFKKAFFAQANMPTLVMSKQ
DTATRGTIYSQDNYSLAASQTLFKLGFDTRFLNPDKEDFFIDFLSIYSNIPKKSLKDAIN
TKGYTILVYDLTPNMAANIRDLNKKFLAFGVFQNFKDVHDKVWQKQGLNIEVSGVSRHYP
YQNSLEPIIGYVQKQEEDKLTLTTGKKGVEKSQDHLLKAQQNGIRTGKRDVSFNFIQNHS
YTEIERLDGYEVYLSIPLKLQREIETLLDKTKDKLKAKEILVGIINPKSGEILSLASSKR
FNPNAIKTSDYESLNLSVAEKVFEPGSTIKPIVYSLLLDKNLINPKERIDLNHGYYQLGK
YTIKDDFIPSKKAVVEDILIQSSNVGMIKISKNFNPEDFYNGLLGYGFSQKTGIDLSLEA
TGKIPPLSAFKREVLKGSVSYGYGLNATFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGD
IYIPSPKPTFQVISPKSARKMKETLIKVVRYGTGKNAQFEGLYIGGKTGTARVAKNGSYS
AQSYNSSFFGFAEDERQVFTIGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPS
IAIQNALEKNRFKIK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaataacattgactcccactccaatccagagcgatttttagaaacccaaaga
gacaagggttctgttacagcattaatctttttgttgctttttatcatttttttaatggtg
gcttttaaaaaagctttttttgcacaagccaacatgcccactctagtgatgagcaaacaa
gacactgcgactagagggactatctatagtcaagacaactacagcctggccgcttcgcaa
acccttttcaaactgggctttgacacgaggtttttaaacccggataaagaagattttttc
attgatttcctttctatttatagcaatatccctaaaaagtccttaaaagacgccatcaat
acgaaaggctacacgattttagtctatgatctcacgcccaatatggccgctaatattagg
gacttgaataagaaatttttagcctttggggtttttcaaaatttcaaagacgtgcacgat
aaggtgtggcaaaagcaagggctaaacattgaagtgagcggcgtttctaggcattaccct
tatcaaaatagcctagagccaatcattggctatgtgcaaaaacaagaagaagacaagctc
actttaactaccggtaaaaaaggcgttgaaaaatctcaagatcacttgcttaaagcccaa
caaaatggcataagaacaggcaaaagggatgtgagttttaactttatccaaaaccactct
tacacagagattgaacgccttgatggctatgaggtgtatttgagcattcctttaaaactc
caaagagaaattgaaaccctattagataaaactaaagacaaactcaaagctaaagaaatc
ctagtgggtatcattaaccctaaaagcggggaaatcttatcgctggcttcaagcaagcgc
ttcaatcctaacgccattaaaaccagcgattatgaaagcttgaatttgagcgttgccgaa
aaggtttttgagccaggcagcacgatcaaacccattgtttattccttgctgttagacaag
aatttaatcaaccctaaagaacgcattgatttaaaccatggctattaccaattaggaaaa
tacaccattaaagacgactttatccctagtaaaaaagccgttgtggaagacattttgatc
caatctagcaatgtgggcatgataaaaatcagcaaaaatttcaacccagaggatttctat
aacgggcttttaggctatggattttctcaaaaaaccggcattgacttatccttagaagcc
acaggaaagatccctcctttgtccgctttcaagcgtgaagtgttaaagggcagcgtctct
tatggctatgggttgaacgcgacttttttacagcttttaagggcttatgcggtgttttct
aatgaaggcaaattgactaccccttatttagtgcaacgagaaaccgcccctaatggcgat
atttacatccctagccccaaacccacttttcaagtcattagccccaaaagcgctaggaaa
atgaaagaaaccttaatcaaagtggtgcgttatggcacaggtaaaaacgctcaatttgaa
gggctatacatagggggcaaaaccggcacggctagggttgctaaaaacgggagttatagc
gcgcagtcctacaacagctctttttttgggtttgctgaagatgaaaggcaggtttttact
atcggcgtggttatcttaggttcgcacggcaaggaagaatattacgctagcaagattgca
gcccctatttttaaagaaatcactgaaattttagtgcgttacaattatctatcgccctct
attgcgattcaaaatgcgttggagaaaaaccgctttaagataaaataa
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