Helicobacter pylori B38: HELPY_1568
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Entry
HELPY_1568 CDS
T00950
Symbol
pbp2
Name
(GenBank) Penicillin-binding protein PBP2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb00550
Peptidoglycan biosynthesis
hpb01100
Metabolic pathways
hpb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HELPY_1568 (pbp2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HELPY_1568 (pbp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpb01011
]
HELPY_1568 (pbp2)
Enzymes [BR:
hpb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HELPY_1568 (pbp2)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HELPY_1568 (pbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
CAX30268
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Position
complement(1556572..1558338)
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AA seq
588 aa
AA seq
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MKNLRYKLLLFVFIGFWGLLILNLFILSVKNQEYYEKLAERNMTKKEFLVPTRGDITDRN
DEFLATNELVFGVFLPSRLKQKELLEKIEIIQKFFPNFSKETLLNNYQKENSLYNHNLIK
VVGFIPYAAMQPLYTKLIQTQGIFALPLDKRYYPNNALASHVLGYVGVASLQDLKDDEEN
QYSQIVGKTGIEKEYNKLLQGKVGYKIMRVNALNQELATLEIVPPSTNNHLQLSLDKRLQ
KEADKLFENKRGAILVMDAENGELLVAGSYPEYNLNDFVGGISQDKWQKLQDDIYNPLLN
RFANALYPPGSVVKMGVGLSFLENLHITENTTIPTPPFIEVGKRKFRDWKKTGHGNSNLY
KAIRESVDVYFYKFGLEISIEKLSKTLREVGFGEKTGVDLPNEFVGIVPDNLWKLKRFNQ
DWRVGDTLITAIGQGSFLATPLQVLAYTGLIATGKLATPHFAINNQQLLKDPLNSFQKKK
LQALRVGMYEVCNHKDGTAYHSTRGSKVTLACKTGTAQVVEIAQNIVNRMKEKDMEYFHR
SHAWITAFLPYEKPKYAITILVEHGEGGSKLGGLLVKMSNKLYELGYL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttcgctataagcttttgctctttgtttttatagggttttgggggttatta
atcttaaatctgtttattctaagcgttaaaaatcaagaatactatgaaaaattggccgaa
cgcaacatgactaaaaaggaatttctagtccctacaaggggcgatattacagacagaaat
gatgagtttttagccactaacgaattggtgtttggcgtgtttttgcccagtagactgaaa
caaaaagaacttttggaaaaaattgaaatcatccaaaagtttttccctaacttttctaaa
gaaacgcttttaaacaattaccaaaaagaaaattcgctttataaccataacctcattaaa
gtggttggcttcattccttatgccgccatgcaacctctttataccaaactcatccaaact
caaggcatttttgcacttcccttagacaagcgctactaccctaataacgctttagcttcg
catgttttaggctatgtgggggtggcaagcttgcaagatctaaaagacgatgaagagaat
caatacagccagattgtgggcaaaaccggcattgaaaaagaatacaacaagctcttacaa
ggcaaggtgggctataaaatcatgcgtgtcaatgcgctcaatcaagaattagccacttta
gaaatagtgccaccaagcaccaacaaccacttgcaattgagtttagacaaacgcttgcaa
aaagaagcggacaagctctttgaaaataaaaggggggctattttagtgatggatgcagaa
aatggggaattgctcgttgcaggaagttaccctgaatacaatttgaacgattttgtaggc
gggatcagtcaagacaaatggcaaaaacttcaagatgatatttataaccccttattaaac
cgcttcgctaacgccttatatccgccgggatctgtggttaaaatgggcgttgggttaagc
tttttagaaaaccttcatatcacagaaaacaccactatccccacaccgccttttattgaa
gtgggtaagcgcaaattcagagactggaaaaaaacagggcatggcaattctaatttgtat
aaagccattagggagtccgtggatgtgtatttttataagtttgggcttgaaatctctata
gaaaaactctctaaaactttaagggaagtgggctttggggaaaaaacgggcgttgatttg
ccgaatgaatttgtggggattgtgccggataatttgtggaaactcaaacgcttcaatcaa
gattggcgtgttggggacacgctcattaccgctattgggcaaggttcttttttagccacg
cccttacaagtgctagcctacacgggactcattgcgacaggcaaactggcgacgcctcat
tttgctatcaacaaccaacagctgctcaaagaccccctgaatagttttcaaaaaaagaag
ctccaagccttgcgcgtgggcatgtatgaagtgtgcaaccataaagacggcaccgcttat
cattccacaaggggttctaaggttaccttagcgtgtaaaaccggcaccgcgcaagtcgta
gaaatcgctcaaaacatcgtcaatcgcatgaaagaaaaggatatggagtatttccatcga
tcccatgcgtggattaccgcattcttgccttatgaaaaacccaaatacgctatcactatt
ttagtagaacatggggaaggagggtcaaaactagggggcttgttagtgaaaatgagcaat
aaactctatgagcttggctatctttaa
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