KEGG   Helicobacter pylori PeCan4: HPPC_02575
Entry
HPPC_02575        CDS       T01322                                 
Name
(GenBank) cag pathogenicity island protein Beta
  KO
K12090  cag pathogenicity island protein 5
Organism
hpc  Helicobacter pylori PeCan4
Module
hpc_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hpc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpc02044]
    HPPC_02575
Secretion system [BR:hpc02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPPC_02575
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind Membra_charge F59B103_C RIC3
Other DBs
NCBI-ProteinID: ADO06755
LinkDB
Position
complement(504255..506501)
AA seq 748 aa
MEDFLYNTLYFIEDYKLVVIFSFIGLIALFFLYKFIKAQKKAFKDKANQPQKKKNFKEII
IEGLKERVKTFGFWLQAILLLSYSFITSGLFFLILLGNFYDDNRSPESDDDLFDIWIYAI
QDFPAYYFKALCFSSLKIYGFNISLVVYSSILCSYIFITFFVWFLKYLTRTRDIGANKKV
DDLFGSASWETEEKMIKAKLITPNNKKRAFDKREVIVGRRGLGDFIAYAGQAFIGLIAPT
RSGKGVGFIMPNMINYPQNIVVFDPKADTMETCGKIREKRFNQKVFIYEPFSLKTHRFNP
FAYVDFGNDVVLTEDILSQIDTRLKGHGMVASGGDFSTQIFGLAKLVFPERPNEKDPFFS
NQARNLFVINCNIYRDLMWTKKGLEFVKRKKIIMPETPTMFFIGSMASGINLIDEDTNME
KVVSLMEFFGGEEDKSGDNLRALSPATRNMWNNFKTMGGARETYSSVQGVYTSAFAPYNN
AMIRNFTSANDFDFRRLRIDEVSIGVIANPKESTIVGPILELFFNVMIYSNLILPIHDPQ
CKRSCLMLMDEFTLCGYLETFVKAVGIMAEYNMRPAFVFQSKAQLENDPPLGYGKNGAKT
ILDNLSLNMYYGINNDNYYEHFEKLSKVLGKYTRQDVSRSIDDNTGKTNTSISNKERFLM
TPDELMTMGDELIILENTLKPIKCHKALYYDDPFFTDELIKVSPSLSKKYKLGKVPNQAT
FYDDLQAAKTRGELSYDKSLVPVGSSEL
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggaagactttttgtataacaccttatatttcatagaggattataagttggttgttatt
tttagtttcatagggttaatagcgttattttttctttacaaattcataaaagctcaaaaa
aaggcttttaaagataaagctaaccaacctcaaaagaaaaaaaactttaaagaaatcatt
atagaggggctgaaagaaagagttaaaacctttggcttttggttgcaagctatactatta
ctatcctattcttttatcacatcagggttatttttcttgattctcttaggtaatttttat
gacgataatagatcgcctgagagtgatgacgatctttttgatatatggatctatgcgata
caagattttcctgcatactattttaaggcactttgttttagttcactcaaaatttatggg
ttcaatatatccttagtcgtatatagttctattttatgctcttatatcttcattaccttt
tttgtgtggttcttaaaatacttaactcggactagagacataggagcgaataaaaaagtt
gatgatctctttgggagtgcgagttgggaaactgaagagaaaatgatcaaagccaagctc
atcacgcccaacaacaaaaaacgcgcctttgacaaacgagaggttattgtaggcaggcgt
ggcttgggggattttatcgcttacgcagggcaggcgtttattggactcattgcccctact
aggagcggtaaaggtgtgggtttcatcatgcccaatatgatcaattatcctcaaaatatc
gttgtgtttgaccctaaagctgacactatggaaacttgcggaaaaatcagagaaaaacga
ttcaaccaaaaagtgttcatctatgaacctttctccttaaaaacacaccgatttaatcct
ttcgcttatgtggattttggtaatgatgtggttttgactgaagacatactctctcaaatt
gacacacgcctaaaagggcatggcatggtggctagtggaggggatttttccactcaaatc
tttggattggcaaagctcgtgttccctgaaagacctaatgaaaaagatcctttttttagc
aatcaagcacgaaatctttttgtcattaattgcaatatttatagggatctcatgtggact
aaaaaggggcttgagtttgtcaaaagaaaaaaaatcatcatgcctgaaacccctacgatg
tttttcataggttctatggcaagcggtatcaacttgattgatgaagacacaaacatggaa
aaagtcgtgtctctgatggaattttttggaggtgaagaagataagagtggcgataatcta
agagcgcttagtcctgctactagaaacatgtggaacaacttcaaaacaatgggtggcgct
agagaaacttacagctctgttcaaggggtctatacctcagcgtttgcgccttacaataat
gctatgattaggaatttcacgagcgctaatgattttgatttcaggcgtttgaggattgat
gaagtgagtattggcgtgatcgctaaccctaaagaaagcactattgttgggccgatatta
gagctgtttttcaatgtgatgatttatagcaaccttattctgccaatccatgatccgcaa
tgcaaaagaagttgtttgatgcttatggacgagttcacgctctgtggctatttagaaacc
tttgtgaaagcggtagggattatggcagaatacaacatgcgccctgcctttgtgtttcaa
agtaaggcacaactagagaatgaccccccacttggttatggtaaaaatggcgctaagact
attttagacaacctttctttaaatatgtattatgggattaacaacgataactactatgaa
cattttgaaaaactttctaaggtgttggggaaatacactagacaagacgtgagccgaagc
attgatgacaataccggtaagaccaatacttctatcagcaacaaagagcggtttttgatg
acccctgatgaattgatgaccatgggcgatgagcttatcattttagaaaacacgctcaaa
cccatcaaatgccacaaggcactctactatgatgatccgttcttcaccgatgaactcatt
aaggtgagtccaagcttaagcaagaaatacaaattggggaaagtgcctaatcaagcaact
ttctatgatgatttgcaagccgctaaaactagaggcgaattgagctatgacaagtcttta
gtgcctgtgggttcaagcgaattgtga

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