Helicobacter pylori PeCan4: HPPC_05175
Help
Entry
HPPC_05175 CDS
T01322
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hpc
Helicobacter pylori PeCan4
Pathway
hpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPPC_05175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpc03400
]
HPPC_05175
Enzymes [BR:
hpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPPC_05175
DNA repair and recombination proteins [BR:
hpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPPC_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_19
PriA_3primeBD
ADDB_N
AAA_22
PhoH
nSTAND3
AAA_7
AAA_30
SLFN-g3_helicase
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ADO07248
LinkDB
All DBs
Position
complement(1054981..1056840)
Genome browser
AA seq
619 aa
AA seq
DB search
MFYYLIAPLKNKTPPLTYFSKERHLKGALVNIPLRSKTLLGVVLEEVSKPSFECLELEKT
PYFLLPFQIELAIFIAQYYSANLSSVLSLFTPFKECDGMGLEKIEPVLNALSQTQTDALK
ELQKHSASLLFGDTGSGKTEIYMHSIAQTLEQKKSALLLVPEIALTPQMQQRLKKAFKEN
LGLWHSKLSQTQKKQFLEKLYSQEIKLVVGTRSALFLPLKELGLIIVDEEHDFSYKSHQS
PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKDKALVRLKGRYIPTQKNIIFEKTE
RFITPKLLETLKQVIDKNEQAIIFVPTRANFKTLLCQSCYKSVQCPFCSVNMSLHLKTNK
LMCHYCHFSSPIPKICNACQSEVLVGKRIGTMQVLNELEGLLKGAKIAILDKDHTSTPKK
LHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAVILGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCGLYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSSCLEKGVTLSNFKAPIEKIASSYRYLILLRSKNPLSLIKSVHAF
LKTAPNIPCSVNMDPVDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctattacttgatcgctcctttaaaaaataaaaccccccctttaacttacttttct
aaagaacgacaccttaaaggagcgttagtcaatatccctttaaggagtaaaacgcttttg
ggcgtcgttcttgaagaagtttcaaaaccctcttttgaatgcctagaattggaaaaaacc
ccttattttttactcccctttcaaatagagctcgctatttttattgctcaatattactcg
gctaatctttcttcagtcttaagtctttttaccccttttaaagaatgtgatggaatgggg
ttagaaaaaattgagcccgttcttaatgcgttaagccaaacgcaaacagacgctttaaaa
gaattgcaaaagcattcagcaagcctgctctttggcgatacgggtagcgggaaaaccgag
atttatatgcattcaatcgctcaaactttagagcaaaaaaaaagcgctttattgttagtg
ccagaaatcgccctcacccctcaaatgcaacaacgccttaaaaaggcttttaaagaaaat
ttaggcttgtggcatagcaaactttctcaaacccaaaaaaaacaatttttagaaaagctt
tattcgcaagaaatcaaattagtggtaggcacacgaagcgcgttgtttttaccccttaag
gaattgggtttaatcattgtagacgaagagcatgacttttcttataaatctcatcaaagc
cctatgtataacgctagggatttgtgcttgtatttatcccataaattccctattcaagtg
attttaggctctgctacgccaagtttaaatagttacaaacgctttaaagataaggcttta
gtgcgcttaaaggggcgctatatccctacgcaaaaaaacattatttttgaaaaaaccgag
cgttttatcacgcccaaactcctagaaacgctaaaacaagttatagacaaaaacgagcaa
gccattatttttgtgcctacaagggctaatttcaaaaccttgctgtgccaaagttgttac
aaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaagaccaacaaa
ctcatgtgccattattgccatttttcaagccctatccctaaaatttgcaacgcatgccaa
agcgaagtattagtgggtaaaaggataggcaccatgcaagtgttgaacgagttggaaggc
cttttgaagggcgctaaaatagcgattttagataaagatcacaccagcactccaaaaaaa
ctccacaatattttaaacgatttcaacgctcaaaaaaccaatatcttaatcggcactcaa
atgataagcaaggggcatgattacgctaaagtgagtttagcggttatcttaggcatagac
aatatcatcaaatccaatagttacagggctttagaagaaggcgtgtcgttactttatcaa
atcgctgggaggagcgctaggcaaatttctggccaagtgttcattcaaagcaccgaaacg
gatctattagaaaatttcttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcggactctacccgcctttttcaaggctgtgtttgttagagtttaagcataaaaac
gaagaaaaagcccaacaattgagcctaaaagcctctcaaaccctttcttcgtgtttagaa
aagggcgtaacgctctctaatttcaaagcccccattgaaaaaatcgcctcttcttaccgc
taccttattttgttgcgttccaaaaaccctttaagcctaatcaaaagcgtgcatgcgttt
ttaaaaaccgcccccaatatcccttgtagcgtgaacatggatcctgtggatattttttaa
DBGET
integrated database retrieval system
