Helicobacter pylori PeCan4: HPPC_06125
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Entry
HPPC_06125 CDS
T01322
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hpc
Helicobacter pylori PeCan4
Pathway
hpc03030
DNA replication
hpc03430
Mismatch repair
hpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPPC_06125
03430 Mismatch repair
HPPC_06125
03440 Homologous recombination
HPPC_06125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpc03032
]
HPPC_06125
03400 DNA repair and recombination proteins [BR:
hpc03400
]
HPPC_06125
Enzymes [BR:
hpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPPC_06125
DNA replication proteins [BR:
hpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPPC_06125
DNA repair and recombination proteins [BR:
hpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPPC_06125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DUF1877
Motif
Other DBs
NCBI-ProteinID:
ADO07435
UniProt:
E1Q3K6
LinkDB
All DBs
Position
complement(1244411..1245433)
Genome browser
AA seq
340 aa
AA seq
DB search
MYRKDLDNYLKQRLPKAVFLYGEFDFFIHYYIQTISSLFKCDNPDMETSFFYASDYEKSQ
IATLLEQDSLFGGSSLVILKLDFALHKKFKENDINLFLKALERPSHNRLIIGLYNSKSDT
TKYKHTSEIVVKLFQKSPLKDEAIHARFFIPKAWESLKFLQERANFLHLDISGHLLNALF
ETNNEDLSISFNDLDKLAILNAPITLEDIQELSSNAGDMDLQKLILGLFLKKSVLDVYDY
LLKEGKKDADILRGLERYFYQLFLFFAHIKTTGLMDAKEVLGYAPPKEIAQNYAKNALRL
KEAGYKRVFEIFRLWHIQSMQGQKELGFLYLTPIQKIINP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtaaagatttggacaattatttaaaacaacgactccctaaagcggtgtttttg
tatggggaatttgatttttttatccattattacattcaaacgattagctcgctttttaaa
tgcgataaccctgatatggaaacttcgtttttttatgcgagcgattatgaaaaaagccag
attgcgacccttttagagcaggattctttatttggagggagcagtttagtcattttaaaa
ctggattttgccttgcataagaaatttaaggaaaatgacatcaatctttttttaaaagct
ttagagcggcctagccataacaggcttatcatagggctttataattctaaaagcgacacc
acaaaatacaaacacactagcgaaattgtcgttaaacttttccaaaaaagccccttgaaa
gatgaagcaatccatgcgcgcttttttatccctaaagcgtgggagagtttgaaattctta
caagaaagggctaattttttacatttagacatcagcggtcatcttttaaacgctcttttt
gaaaccaataacgaagatttaagcatttcgtttaacgatttagacaagctagcgatatta
aacgcgcccatcactttagaagacattcaagaattaagctccaatgcgggggatatggat
ttacaaaaactcattttagggctttttttaaaaaaaagcgttcttgatgtttatgattat
ttgttaaaagagggcaaaaaagatgcggatattttaagggggttagagcgctatttttac
cagctttttttatttttcgctcatattaaaacgaccggtttaatggatgctaaagaggtt
ttaggctacgctccccctaaagagattgcccaaaattacgctaaaaacgccctgcgtttg
aaagaagccggctataaaagggtttttgaaatttttaggttatggcacattcaaagcatg
caagggcaaaaggagttgggttttttgtatttgacccccattcaaaaaatcatcaaccct
tga
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