Helicobacter pylori PeCan4: HPPC_06630
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Entry
HPPC_06630 CDS
T01322
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpc
Helicobacter pylori PeCan4
Pathway
hpc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPPC_06630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpc03400
]
HPPC_06630
Enzymes [BR:
hpc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPPC_06630
DNA repair and recombination proteins [BR:
hpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPPC_06630
Prokaryotic type
HPPC_06630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADO07534
LinkDB
All DBs
Position
complement(1324639..1325340)
Genome browser
AA seq
233 aa
AA seq
DB search
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLDNEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNKAASHQYIGWEAFSDQILMRLFEANAPLIVVLLGKV
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQKAYREIYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactacgctcctttgagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttatttcttagaaatagaaaaacgctacctagaagccctaaaaagccct
aaaaccattttccccaaaagctctaatctgttttatgcgctcaatctaacgcctcctagc
gcggttaaaatcatccttttagggcaagacccctaccattccacctacctagacaatgag
caagaattgccggtggcgatgggcttgagctttagcgtggaaaaaaacgcccccattcct
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgcctgtgccttgt
tgtggggatttgagcgcatgggctaaaaggggcatgctgttattgaacgccattttaagc
gtggaaaaaaataaggccgcttcgcaccaatatattggctgggaagcttttagcgatcaa
atattgatgcgcctttttgaagccaacgcccccttaatcgtggtgttattagggaaagtc
gcccaaaaaaagatcgcgctaatccccaaaaacaaacacatcatcatcacagcccctcac
cctagccccttatctagaggttttttagggagtggggtttttacaagcgttcaaaaagct
tatagagagatttatcataaggattttgattttagtttatga
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