Helicobacter pylori PeCan4: HPPC_07605
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Entry
HPPC_07605 CDS
T01322
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpc
Helicobacter pylori PeCan4
Pathway
hpc03030
DNA replication
hpc03430
Mismatch repair
hpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPPC_07605
03430 Mismatch repair
HPPC_07605
03440 Homologous recombination
HPPC_07605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpc03032
]
HPPC_07605
03400 DNA repair and recombination proteins [BR:
hpc03400
]
HPPC_07605
Enzymes [BR:
hpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPPC_07605
DNA replication proteins [BR:
hpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPPC_07605
DNA repair and recombination proteins [BR:
hpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPPC_07605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADO07727
LinkDB
All DBs
Position
complement(1525210..1526073)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEINLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGIAYEDTLNAPSAHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRTILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARHQETPPPFSLFERTKGLFNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagatattcaagccctaatcgctcgcttaaagcaccag
gatttaagcttaggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaat
ttggaatatttaaaagcatgcgggcttaatttcgtagaaacgagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagagacc
actggctcttgccccctaaaacatgagattttagaaatcggggctgtgcaagtaaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
gctgagcttacaggcatcgcttatgaagacaccctaaacgccccaagcgcgcatgaagct
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtagcccacaacgctaatttt
gattacaactttttagggcgttattttgtagagaaattgcattgccccttattgaattta
aagctttgcactttagatttatccaaacgcaccattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttggtatagaagtcagccacagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgcctgttaaacttgcccagctacatcaaaacc
acaatggatttgattgatttttccaaatgcgctaacaccttgatcaaaagacccccaaga
gccagacaccaagagactccaccgccattttctctttttgagaggacaaaaggcttgttc
aatatcataaaagcgaccagttaa
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