Helicobacter pylori PeCan4: HPPC_07700
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Entry
HPPC_07700 CDS
T01322
Name
(GenBank) DNA topoisomerase I (topA)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpc
Helicobacter pylori PeCan4
Brite
KEGG Orthology (KO) [BR:
hpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpc03032
]
HPPC_07700
03400 DNA repair and recombination proteins [BR:
hpc03400
]
HPPC_07700
Enzymes [BR:
hpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPPC_07700
DNA replication proteins [BR:
hpc03032
]
Prokaryotic type
DNA Topoisomerases
HPPC_07700
DNA repair and recombination proteins [BR:
hpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPPC_07700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
ADO07744
LinkDB
All DBs
Position
1542751..1544784
Genome browser
AA seq
677 aa
AA seq
DB search
MKDSVIIIESPNKVEKIKQLTGAEVYATIGHFTNLIGVDIENNFACKFEIKEDKAKKINF
LINACRDKKVYIATDPDREGYGIGYQFYEKIKNVASEIYRAEFHEITPSGIEKGLKNAVL
FSRSNTNLYQSFLGRIASDQVVGFALTSYLRKSLSLSELSAGRVQTPALALICQRDQEIR
DFDKLDDKEKVDYQIQAKIVYNEKEAIIKHVRANEKNELVDFKFKDKNEASQFLEDLKDG
LGSMSVLVSVKESLSNKEPKKPFTTSKLLSQANKALKIPTKEIAQLAQKLFEVGLITYHR
TDSEFLSPEYLKEHEAFFEPIYPSIYQYREYKAGKNSQAEAHEAIRITHLHALKDLEKVC
NDAKISEELALKLYQLIYANTICSQSRNALYNQYDCIFKVKSESFKLSFKLLKEKGFLEI
EELIQGKEELNKEEQESEIENFSLKENDSVPLKEVFIKEIEKPSPKPYKESAFIPLLESE
GIGRPSTYASFLDLLLKRKYISIDTKTNAITPTSQGLEVISFFKKDKEVDFIALTSKDKS
KLGSTTKQFEECLDLIMRGEASYEKFMSEVIGKLKSTAKFYQTQSTDNNMPTDKQLELID
KICKDKKLQKPSQEILQNKEKCSDWIAEHVKEKPSQKQLDLVKKICEECKLAMPINKILN
DKFAISKWIDEHKKTKK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagcgtgattatcattgagagccctaataaggttgaaaagattaagcaacta
acaggtgcggaagtttatgcaactatagggcattttactaaccttataggcgtagatatt
gaaaacaattttgcttgtaagtttgaaatcaaagaagacaaggctaaaaaaataaatttt
ttaatcaatgcttgtagggacaaaaaagtctatatcgctactgaccctgatagagagggc
tatggtattggctatcaattttatgaaaaaattaaaaatgtagctagtgaaatttatcgt
gcagaatttcatgagatcacaccaagcggtattgaaaagggcttaaaaaatgcggtgtta
ttttctcgttccaacactaatttataccaatcattcttaggtaggattgcaagcgatcag
gttgttggatttgctctaacaagctatttaagaaaaagtttaagtcttagtgaattgagc
gctggcagagtgcaaactccagctctagctttaatctgccaaagagatcaagaaataagg
gattttgataagttggatgataaagaaaaagtagattatcaaatccaagctaagattgtg
tacaatgaaaaagaagcgattattaagcatgtaagggcgaatgagaaaaacgaactagta
gattttaaatttaaagataaaaatgaagcatctcaatttttagaagatttaaaagacgga
ttaggctctatgagtgttctagtttcagtaaaagaaagtctatccaataaagagcctaaa
aaacctttcaccacttctaaacttttatcccaagctaataaagcattaaaaatacctact
aaagaaatcgcacagcttgctcaaaagctctttgaagttggtctcatcacttatcacaga
actgatagtgaatttttaagtcctgagtatctcaaagagcatgaagcgttttttgaacct
atttatccgagtatttatcaatacagggaatataaggctggtaaaaattcacaagctgaa
gcgcatgaagccataagaattacacatctgcatgctttaaaagacttagaaaaagtgtgc
aatgacgctaaaataagcgaagaattagcgctgaagttgtatcaacttatttatgccaat
acaatttgttctcaaagtagaaacgctttatacaatcaatatgattgtatctttaaagtt
aaaagcgagagttttaagctctctttcaaacttttaaaagaaaagggttttttagagatt
gaagaactcattcaaggcaaagaagaacttaacaaggaagaacaagaaagtgaaatagaa
aacttttcattaaaagaaaatgacagtgttccattaaaagaagtttttattaaagaaata
gaaaaacccagtcctaaaccttataaagaaagtgcctttattcccttattagaaagcgag
gggattggtcgtcctagcacttatgcgagcttcttagatcttcttttgaagcgtaaatat
attagcattgatacaaaaactaacgccatcacccctactagtcaaggattagaagtgatt
tcatttttcaaaaaagataaagaagtggatttcatcgctcttacaagcaaggataagagc
aaattaggaagcactaccaaacaatttgaagaatgtttggatttaatcatgagaggtgaa
gctagttatgaaaagtttatgtctgaagtcataggtaagttaaaaagcaccgccaagttt
tatcaaacacaatctactgacaataacatgcctactgataagcaacttgaacttatagac
aaaatttgtaaagataaaaaattacaaaaacccagtcaagaaatcttgcagaacaaggaa
aaatgttctgattggattgcagagcatgttaaagaaaaacccagtcaaaaacaactggat
ctggttaaaaaaatttgtgaagagtgcaaattggcaatgcccatcaataaaatattgaat
gacaaattcgctatctctaaatggattgatgaacacaaaaagacaaagaaatga
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