Helicobacter pylori 51: KHP_0118
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Entry
KHP_0118 CDS
T02082
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpd
Helicobacter pylori 51
Brite
KEGG Orthology (KO) [BR:
hpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpd03032
]
KHP_0118 (topA)
03400 DNA repair and recombination proteins [BR:
hpd03400
]
KHP_0118 (topA)
Enzymes [BR:
hpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KHP_0118 (topA)
DNA replication proteins [BR:
hpd03032
]
Prokaryotic type
DNA Topoisomerases
KHP_0118 (topA)
DNA repair and recombination proteins [BR:
hpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KHP_0118 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Zn_ribbon_LysW
Lar_restr_allev
DUF7575
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ACX97336
UniProt:
A0AAI7ZUV1
LinkDB
All DBs
Position
134809..137019
Genome browser
AA seq
736 aa
AA seq
DB search
MKHLIIVESPAKAKTIKNFLDKSYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASTTYIATDEDREGEAIGYHVACLIGGKLESYPRIVFHEITQNAILN
ALKTPRQIDMSKVNAQQARRFLDRIVGFKLSSLIASKITKGLSAGRVQSAALKLVIDRER
EIKAFKPLTYFTLDAYFEPHLEAQLISYKGNKLKAQELIDGKKAQEIKNELEKESYTISS
IIKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRT
DSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIVLEPNALK
DYLKPEELKLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISL
LQHRDYIKVEKKQISALESAFKVMEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFVACNNYPKCKY
VKQAENANDEARQESCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNANEIIEG
VKCPECGGDIALKRSKKGSFYGCNNYPKCRFLSNHKPINKRCEKCHYLMSERIYRKKKAH
ECIKCKERVFLEEDDG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccttattatcgtagaatcccccgcaaaagccaaaaccattaaaaattttttg
gataaaagttatgaagtcatcgcctctaaagggcatgttagggatttatccaaattcgct
ttaggcattaaaattgatgaaacaggcttcactcctaattatgtcgtggataaagaccat
aaagagcttgtcaaacagatcatagagctttctaaaaaggcatctaccacctacatcgct
accgatgaagacagagaaggggaagcgataggctatcatgtggcatgcttgattgggggg
aaattagagagctatcctaggattgtttttcatgagatcacgcaaaatgcgattttaaac
gctctaaaaaccccacgacaaattgacatgtcaaaagtcaatgcccaacaagccagacgc
tttttggatcggatcgtggggtttaagctcagctcgttgattgcatcaaaaatcactaaa
ggtttgagtgctgggcgggtgcaaagcgcggctttaaagcttgtgattgatagggagaga
gagatcaaagcctttaagcctttaacctacttcacgctagacgcttattttgagccgcat
ttagaagcgcaactcattagctataagggtaacaaactcaaagcccaagagcttattgat
ggaaaaaaagctcaagagattaaaaacgaattagaaaaagaaagctacacgatttctagt
attattaaaaaatctaaaaaatcccccacaccgccccctttcatgacttctactttacag
caaagcgcttccagtcttttaggcttttcgcccacaaaaaccatgagtatcgctcaaaaa
ttgtatgaaggcgtagccaccccacaaggggttatgggggtgatcacttacatgaggacc
gatagcttgaatatcgctaaagaagctttagaagaagcgaggaataagattttaaaagac
tatggcaaagactacttaccccctaaagccaaggtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcaggcccacttctattgttttagagccaaacgctttaaaa
gactaccttaagcctgaagaattaaagctctataccttaatttacaaacgcttcttagct
tctcaaatgcaagacgctctttttgaaagccaaagcgtggttgtggcttgcgaaaaaggc
gagtttaaagccagtggcagaaaactcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaacgaccccattaaattagaaaaa
ctagagagcaacgcccatgttacagaacctccagcacgctattcagaagcgagcttgatt
aaagttttagaaagtttaggcataggcaggcccagcacctacgccccaacgatttccctc
ttacaacacagagactacatcaaggtagaaaaaaagcaaatcagcgctttagagagcgct
tttaaggtgatggaaattttagaaaagcattttgaagaaatcgtggattccaaattcagc
gcttctttagaagaggaactggacaatatcgctcaaaataaagccgactatcagcaagtc
ttaaaggacttttactacccttttatggataaaattgaagctgggaaaaagaatatcatc
tctcaaaaagtgcatgaaaaaaccggccaatcatgccctaaatgcggtggggaattggtc
aaaaaaaatagccgttatggggagtttgtcgcttgcaacaattaccctaaatgcaaatat
gtcaaacaagctgaaaacgccaatgatgaagccaggcaagaatcgtgcgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggggcgtttttagcttgcaacaactatcct
gaatgcaaaaacaccaaatcgttaaaaaacacccctaacgcaaacgaaatcatagaaggc
gtgaaatgcccagaatgtgggggggatattgccttaaaaaggagtaagaaaggctcgttt
tatggctgtaacaattaccctaaatgccgttttttatccaaccataagcccattaataag
cgttgtgaaaaatgccattatttgatgagtgaaagaatctatcgcaaaaaaaaggcgcat
gagtgcattaaatgcaaagagcgcgtgtttttagaggaagatgatggctaa
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