Helicobacter pylori 51: KHP_0566
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Entry
KHP_0566 CDS
T02082
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hpd
Helicobacter pylori 51
Pathway
hpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KHP_0566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpd03019
]
KHP_0566
Messenger RNA biogenesis [BR:
hpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KHP_0566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
UPF0242
KH_KhpA-B
KH_NusA_2nd
DUF3915
Motif
Other DBs
NCBI-ProteinID:
ACX97773
UniProt:
A0AAI7ZVR2
LinkDB
All DBs
Position
594508..596097
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AA seq
529 aa
AA seq
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MSMGLIYISLEVLVACLITALAMYYVMKKIYYARGQTILKGASAKAKLMEFQAKSFVEAE
EMRMKSQECKLQQQYENKNLQLQTHFEKKEAHLKHLEAQHKEFVRDEKRHLEKEKQELEK
ERQILEQERENFKKQHAVCKEAQAKALDAMLNYLAYTKDEIKNMILEQLEEELEVQKSAL
IKRYEKEAKEEGKKKSYAILAEATARFAGNYAAENLTTRIALPCSDYIGRVIGKDGKNIE
AFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARN
MEKELLSEGESVVLELELGVMEDELKFLIGKMRYRSSFGQNALQHSKEVALLAGLIAEQL
GGDKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEIMS
VECASVCAADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIV
KSNQVRDNQVPIIARKIAKKIEESTQYVGEVGVQVVRESRFKTTATLKQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggggttaatttacatttcattagaagtcttggtagcgtgtttgattaccgct
ctagccatgtattatgtgatgaaaaagatctattacgctagagggcaaaccattttaaaa
ggcgcttcagctaaagccaaattgatggagtttcaagctaaatcttttgtggaagctgaa
gagatgcgcatgaaaagccaagaatgcaaattgcaacagcaatacgaaaataaaaatttg
cagctccaaacccattttgaaaaaaaagaagcgcatttgaagcatttagaagcgcaacac
aaagaatttgtaagagatgaaaaacgccatttagaaaaggaaaaacaagagcttgaaaaa
gaacgccaaatcttagaacaagagagggaaaattttaaaaaacagcacgctgtttgtaaa
gaagctcaagccaaagcgctagatgcgatgctcaattacttggcttataccaaagatgaa
attaaaaacatgattttagagcaattagaagaagaattagaagtgcaaaaaagcgcgtta
atcaagcgttatgaaaaagaagccaaagaagagggcaagaaaaaatcgtatgccatttta
gcggaagcgacagcccgttttgcgggtaattatgcggcagagaatttaacaactcgcatt
gctttgccttgctcagattatatcggtcgtgtgataggcaaagacgggaaaaatattgaa
gcgtttaaaaaagtcagtggggtggatatagaatttagcgaagatagcagcgaattgtgt
ttgtccagtttcaatctttatcggcgtgaagtagcgagcgagacgcttaaaattttaata
gaagacggccgtatccagcctaacaggattgaagaggtctatcatagagtcgcgcgcaac
atggaaaaagaattgctttctgaaggggagagtgtggtgttagaattagagcttggggtt
atggaagatgagcttaaatttttaataggcaaaatgcgttatcgttccagttttgggcaa
aacgccttacagcattctaaagaagtcgctcttttagccggcttgattgcagagcagctt
ggaggggataaaaaactcgccagaagagccggtattttgcatgatattggcaaagcgctc
acccaagagcttgggagagaccatgtgaatttaggggttgaggtgtgcaagcgccataaa
gaagacccggttgtgattaatgcgatttatgcccaccatgggcatgaagaaatcatgagc
gtggagtgtgcgagcgtgtgcgcggctgatgcgctttcagcagggcgtccgggggctaga
agaaagagcgatgaagaatacgctaaacgcatgcaagctttagaagagatcgcgctagaa
tttgatggggtggaaaaagcgtatgcgatggagagcgggcgagaattaagagtgattgtc
aaatccaaccaggttagggacaatcaagtgcctattattgccagaaagatcgctaaaaag
atagaagagagcactcagtatgtgggcgaagtgggcgtgcaagtggtgcgagaaagccgt
ttcaaaacgaccgctacgctcaagcaataa
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