KEGG   Helicobacter pylori 51: KHP_1015
Entry
KHP_1015          CDS       T02082                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
hpd  Helicobacter pylori 51
Pathway
hpd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hpd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KHP_1015 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpd03400]
    KHP_1015 (uvrB)
DNA repair and recombination proteins [BR:hpd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KHP_1015 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      KHP_1015 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD Microtub_bd AAA_30 Kinesin DUF87 AAA_7 HAM1_N
Other DBs
NCBI-ProteinID: ACX98211
UniProt: A0AAI7ZWK7
LinkDB
Position
complement(1123803..1125779)
AA seq 658 aa
MPLFDLKSPYPPAGDQPQAIEALTKSLKNNNHYQTLVGVTGSGKTYTMANIIAQTNKPAL
IMSHNKTLCAQLYSEFKAFFPHNRVEYFISHFDYYQPESYIPRRDLFIEKDSSINDDLEC
LRLSAATSLLGYDDVIVIASVSANYGLGNPEEYLKVMEKIKVGEKRAYKSFLLKLVEMGY
SRNEVVFDRGSFRATGECVDIFPAYNDAEFIRIEFFGDEIERIAVFDALEKNEIKRLDSV
MLYAASQFAVGSERLNLAIKSIEDELALRLKFFKEQDKMLEYNRLKQRTEHDLEMISATG
VCKGIENYARHFTGKAPNETPFCLFDYLGIFEREFLVIVDESHVSLPQFGGMYAGDMSRK
SVLVEYGFRLPSALDNRPLKFDEFIHKNCQFLFVSATPNKLELELSQKNVAEQIIRPTGL
LDPKFEVRDSDKQVQDLFDEIKLVVARDERVLITTLTKKMAEELCKYYAEWGLKARYMHS
EIDAIERNHIIRSLRLKEFDILIGINLLREGLDLPEVSLVAIMDADKEGFLRSETSLIQT
MGRAARNANGKVLLYAKKITQSMQKAFEITSYRRAKQEEFNKLHHITPKTVTRALEEELK
LRDDEIKIAKALKKDKIPKSEREKIIKELDKKMRECAKNLDFEEAMRLRDEIAKLRTL
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgcctttatttgatttaaaaagcccttacccaccagcaggcgatcagccccaagccata
gaagccttaacgaaaagcttaaaaaataacaaccattatcaaactttagtaggggttaca
gggagcggtaagacttatacgatggccaatatcatcgctcaaaccaacaaacccgctttg
atcatgagccataataagaccttatgcgcgcagctctatagcgagtttaaagcgtttttc
ccgcataatagggtggaatattttatctcccactttgactactaccagcctgaaagctat
atccctagaagggatttattcattgaaaaagacagctctattaatgatgatttagagtgt
ttgagattgagcgcggccacctcacttttaggttatgatgatgtgatcgtgatagcgagc
gtttcggctaattatggtttgggtaaccctgaagaatatttaaaagtcatggaaaaaatc
aaagtgggtgagaagcgcgcttataagagttttttattaaagctagtagaaatgggttat
agccgtaatgaagtggtgtttgatagggggagcttcagggcgaccggagaatgcgtggat
attttccccgcttataatgacgctgaatttatcaggattgaattttttggcgatgagata
gaaaggattgctgtctttgacgctttagaaaaaaatgaaatcaaacgcttggattctgtc
atgctttatgcggccagtcagtttgccgtagggagtgagaggttgaatttagccattaaa
agcattgaagatgaactcgctttaagattgaaattttttaaagagcaggataaaatgctt
gaatacaaccgcctcaaacaacgcaccgagcatgatttagaaatgattagcgcaaccggt
gtgtgtaagggcattgaaaattacgcgcgccattttacaggcaaagcccctaatgaaacg
cctttttgcttgtttgattatttagggatatttgagcgggagtttttagtcattgtggat
gaaagccatgtgagtttgccgcagtttggagggatgtatgcaggggatatgagcaggaaa
agcgttttagtggaatatggttttagattgcctagcgctttagacaaccgccctttaaaa
tttgatgaatttatccataaaaattgccagttcctttttgtgtctgctacgcccaataag
ctagaattagagctttctcaaaagaatgtcgctgagcaaatcattcgccctacagggctt
ttagaccctaaatttgaagtgcgagacagcgataagcaagttcaggatttatttgatgaa
atcaagttagtggtggctagagatgaaagggtgcttatcaccacgctcactaaaaaaatg
gcagaagaattgtgcaaatattatgctgaatggggcttgaaagcgcgttacatgcatagt
gaaattgatgcgattgaaagaaatcacatcatccgctctttaaggcttaaagaatttgac
attttaatagggatcaatctcttaagagaagggctggatttgcctgaagtctctttagta
gcgatcatggatgcggataaagaagggtttttaaggagtgaaacaagcctcattcaaacc
atggggcgagccgctagaaacgctaatggcaaggttttattatacgctaaaaaaatcacc
caaagcatgcaaaaagcctttgaaattacgagctacaggcgcgctaagcaagaagagttt
aataaacttcatcatatcacccccaaaaccgttactcgcgctttggaagaggagttgaaa
ttaagagacgatgagattaaaatcgctaaagccttaaaaaaggacaaaatacctaaaagc
gaaagggaaaaaatcattaaagaactggataaaaaaatgcgagaatgcgcgaaaaatttg
gattttgaagaagcgatgcgtttgagagatgaaatcgctaaattaagaacgctttaa

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