Helicobacter pylori 51: KHP_1015
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Entry
KHP_1015 CDS
T02082
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hpd
Helicobacter pylori 51
Pathway
hpd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KHP_1015 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpd03400
]
KHP_1015 (uvrB)
DNA repair and recombination proteins [BR:
hpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KHP_1015 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KHP_1015 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Microtub_bd
AAA_30
Kinesin
DUF87
AAA_7
HAM1_N
Motif
Other DBs
NCBI-ProteinID:
ACX98211
UniProt:
A0AAI7ZWK7
LinkDB
All DBs
Position
complement(1123803..1125779)
Genome browser
AA seq
658 aa
AA seq
DB search
MPLFDLKSPYPPAGDQPQAIEALTKSLKNNNHYQTLVGVTGSGKTYTMANIIAQTNKPAL
IMSHNKTLCAQLYSEFKAFFPHNRVEYFISHFDYYQPESYIPRRDLFIEKDSSINDDLEC
LRLSAATSLLGYDDVIVIASVSANYGLGNPEEYLKVMEKIKVGEKRAYKSFLLKLVEMGY
SRNEVVFDRGSFRATGECVDIFPAYNDAEFIRIEFFGDEIERIAVFDALEKNEIKRLDSV
MLYAASQFAVGSERLNLAIKSIEDELALRLKFFKEQDKMLEYNRLKQRTEHDLEMISATG
VCKGIENYARHFTGKAPNETPFCLFDYLGIFEREFLVIVDESHVSLPQFGGMYAGDMSRK
SVLVEYGFRLPSALDNRPLKFDEFIHKNCQFLFVSATPNKLELELSQKNVAEQIIRPTGL
LDPKFEVRDSDKQVQDLFDEIKLVVARDERVLITTLTKKMAEELCKYYAEWGLKARYMHS
EIDAIERNHIIRSLRLKEFDILIGINLLREGLDLPEVSLVAIMDADKEGFLRSETSLIQT
MGRAARNANGKVLLYAKKITQSMQKAFEITSYRRAKQEEFNKLHHITPKTVTRALEEELK
LRDDEIKIAKALKKDKIPKSEREKIIKELDKKMRECAKNLDFEEAMRLRDEIAKLRTL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatttgatttaaaaagcccttacccaccagcaggcgatcagccccaagccata
gaagccttaacgaaaagcttaaaaaataacaaccattatcaaactttagtaggggttaca
gggagcggtaagacttatacgatggccaatatcatcgctcaaaccaacaaacccgctttg
atcatgagccataataagaccttatgcgcgcagctctatagcgagtttaaagcgtttttc
ccgcataatagggtggaatattttatctcccactttgactactaccagcctgaaagctat
atccctagaagggatttattcattgaaaaagacagctctattaatgatgatttagagtgt
ttgagattgagcgcggccacctcacttttaggttatgatgatgtgatcgtgatagcgagc
gtttcggctaattatggtttgggtaaccctgaagaatatttaaaagtcatggaaaaaatc
aaagtgggtgagaagcgcgcttataagagttttttattaaagctagtagaaatgggttat
agccgtaatgaagtggtgtttgatagggggagcttcagggcgaccggagaatgcgtggat
attttccccgcttataatgacgctgaatttatcaggattgaattttttggcgatgagata
gaaaggattgctgtctttgacgctttagaaaaaaatgaaatcaaacgcttggattctgtc
atgctttatgcggccagtcagtttgccgtagggagtgagaggttgaatttagccattaaa
agcattgaagatgaactcgctttaagattgaaattttttaaagagcaggataaaatgctt
gaatacaaccgcctcaaacaacgcaccgagcatgatttagaaatgattagcgcaaccggt
gtgtgtaagggcattgaaaattacgcgcgccattttacaggcaaagcccctaatgaaacg
cctttttgcttgtttgattatttagggatatttgagcgggagtttttagtcattgtggat
gaaagccatgtgagtttgccgcagtttggagggatgtatgcaggggatatgagcaggaaa
agcgttttagtggaatatggttttagattgcctagcgctttagacaaccgccctttaaaa
tttgatgaatttatccataaaaattgccagttcctttttgtgtctgctacgcccaataag
ctagaattagagctttctcaaaagaatgtcgctgagcaaatcattcgccctacagggctt
ttagaccctaaatttgaagtgcgagacagcgataagcaagttcaggatttatttgatgaa
atcaagttagtggtggctagagatgaaagggtgcttatcaccacgctcactaaaaaaatg
gcagaagaattgtgcaaatattatgctgaatggggcttgaaagcgcgttacatgcatagt
gaaattgatgcgattgaaagaaatcacatcatccgctctttaaggcttaaagaatttgac
attttaatagggatcaatctcttaagagaagggctggatttgcctgaagtctctttagta
gcgatcatggatgcggataaagaagggtttttaaggagtgaaacaagcctcattcaaacc
atggggcgagccgctagaaacgctaatggcaaggttttattatacgctaaaaaaatcacc
caaagcatgcaaaaagcctttgaaattacgagctacaggcgcgctaagcaagaagagttt
aataaacttcatcatatcacccccaaaaccgttactcgcgctttggaagaggagttgaaa
ttaagagacgatgagattaaaatcgctaaagccttaaaaaaggacaaaatacctaaaagc
gaaagggaaaaaatcattaaagaactggataaaaaaatgcgagaatgcgcgaaaaatttg
gattttgaagaagcgatgcgtttgagagatgaaatcgctaaattaagaacgctttaa
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