Helicobacter pylori 51: KHP_1311
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Entry
KHP_1311 CDS
T02082
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hpd
Helicobacter pylori 51
Pathway
hpd03030
DNA replication
hpd03430
Mismatch repair
hpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KHP_1311 (dnaE)
03430 Mismatch repair
KHP_1311 (dnaE)
03440 Homologous recombination
KHP_1311 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpd03032
]
KHP_1311 (dnaE)
03400 DNA repair and recombination proteins [BR:
hpd03400
]
KHP_1311 (dnaE)
Enzymes [BR:
hpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KHP_1311 (dnaE)
DNA replication proteins [BR:
hpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KHP_1311 (dnaE)
DNA repair and recombination proteins [BR:
hpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KHP_1311 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACX98501
UniProt:
A0AAI8F0P4
LinkDB
All DBs
Position
complement(1423197..1426832)
Genome browser
AA seq
1211 aa
AA seq
DB search
MKENKAFTHLHLHTEYSLLDGANKIKILAKRIKELGMKSVSVTDHGNMFGAIDFYTSMKK
EGIKPIIGMEAYIHNDDNLSSKETKQRFHLCLFAKNQEGYENLMFLSSMAYLEGFYYFPR
INKKLLREHSKGIIASSACLQGEVNYHLNTHNERNRKYGAKGYDEAKKIACEYQEIFEDD
FYLEIMRHGILDQRFIDEQVIKMSLETGLKIIATNDTHYTMPNDAKAQEVAMCVAMGKTL
NDKGRLKHSVHEFYIKSPEEMAKLFADIPEALENTQEIADKCVLEIDLKDDKKNPPTPPS
FKFTKAYAQNEGLNFEDDASYFAHKAREGLKERLVLVPKEKHDQYKERLEKEIEVITNMK
FPGYMLIVWDFIRYAKEMGIPVGPGRGSAAGSLVAFALKITDIDPLKYDLLFERFLNPER
VSMPDIDTDFCQRRRKEIIEYMIEKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKEA
DDFAKLIPNRLGITLKGYEKNGEFIEGAWELEPKIKELVESNELAKQVWEYSLNLENLNR
NAGVHAAALVVDSQKELWHKTPLFASEKTGGIVTQYSMKYLEPVDLIKFDFLGLKTLTVI
DDALKIIKTQHKISVDFLSLDMDDPKVYKTIQSGDTVGIFQIESGMFQGLNKRLRPSSFE
DIIAIIALGRPGPMESGMVDDFVNRKHGIEPIAYAFKELEPILKPTYGTIVYQEQVMQIV
QTIGGFSLGEADLIRRAMGKKDAQIMADNKAKFVEGAKNLGHDGQKAANLWDLIVKFAGY
GFNKSHSAAYAMITFQTAYLKTYYKHEFMAAMLTSESNKIESVARYIDEVRALEIEVMPP
HINSSMQDFSVAEFKNQKSELEKKIVFGLGAIKGVGGEPIKNIIEERAKGDYKSLEDFIS
RVDFSKLTKKSLEPLVKSGSLDNLGYTRKTMLANLDLICDAGRAKDKANEMMQGDNSLFG
AMDGGTKEQVILDMIDLGEHDAKTLLECEYETLGIHVSGNPLDEFKEEIKGFKNLVKSID
IEELEIGSQAYLLGKIMEVKKKIGKRSGKPYGTADILDRYGKFELMLFEKQLSALEELDI
NKPLVFKCKIEEQEEVARLRLFEILDLESAREVKIPKARYKDPEKQKEEVREIPPIEILA
SSSCSLAIVLENDVKKEFLRQIKESALKHQGKRPLYLIIKDKDKQFKIQSDLMVNEKIKD
DFKGLEWRDLA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaataaagccttcacgcatctgcacttgcacacggaatattcgcttttagac
ggagcgaacaagattaaaattctagccaaacgcattaaagaattgggcatgaaaagcgtg
agcgtaactgaccatgggaacatgtttggagcgattgatttttatacgagcatgaaaaaa
gaaggcattaaacctatcatcggcatggaagcgtatatccataatgacgacaacctttct
agcaaagaaaccaaacaacgcttccatttgtgcttattcgctaaaaaccaagagggctat
gaaaatttgatgttcttaagctctatggcgtatttagaagggttttattatttcccgcgc
atcaataaaaagcttttaagggagcattctaaaggcattatcgcttctagcgcatgcttg
caaggggaagtcaattaccatttgaatactcataatgagagaaaccgcaagtatggggct
aaaggctatgatgaagctaaaaaaatcgcttgcgaataccaagaaatttttgaagacgac
ttttatttagaaatcatgcgccatggcattttagatcagcgcttcattgatgagcaggtc
attaaaatgtctttagaaacggggttaaaaatcattgccaccaacgacacccactacacc
atgcctaatgacgctaaggctcaagaagtagcgatgtgcgtagcgatgggtaagacccta
aacgataaggggcgcttgaaacactccgtgcatgagttttacatcaagtctcctgaagaa
atggcgaagctgtttgcagatattccagaagctttagaaaacacccaagaaatcgctgat
aaatgcgttttagagattgatttaaaagacgataaaaagaaccccccaacccctccaagc
ttcaaattcactaaagcttacgctcaaaatgaggggctgaattttgaagatgacgcttct
tattttgcccataaggctagagagggcttgaaagagcgcttagttttagtgcctaaagaa
aagcatgatcaatacaaagaacgcttagaaaaagaaattgaagtcatcacgaacatgaaa
ttcccggggtatatgctgattgtgtgggattttatccgttacgctaaagaaatgggcatt
cctgtagggcctggtagggggagtgcggccgggagtttggtggcttttgctttaaaaatc
acggatattgaccctttgaaatacgatttgctctttgaaaggtttttaaaccccgaaaga
gtcagcatgcctgatattgatacggatttttgccagcgcaggcgtaaggaaatcatagag
tacatgattgaaaaatacggcaaatacaatgtggctcaagtcatcacctttaataaaatg
ttggctaaaggcgtgatcagagatgtcgcaagggttttggacatgccttataaagaagcc
gatgattttgccaaactcatacctaaccgcttaggcatcacgcttaagggctatgaaaaa
aatggcgagttcatagagggggcgtgggaattagagcctaaaatcaaagaattagtagag
agtaatgaattagccaaacaagtgtgggagtattcgctcaatttagagaatttaaaccgc
aatgcaggcgtgcatgccgcagccttagtggtggatagccaaaaagagttgtggcacaaa
acccctttatttgcctctgaaaagaccggcggtatcgttacgcaatattccatgaagtat
ttggagccggtggatttgatcaagtttgacttcttggggcttaaaaccttgaccgtaatt
gatgatgcgcttaaaatcattaaaacgcagcataaaattagcgtggattttttatcgttg
gatatggacgatccgaaagtgtataaaacgatccaaagcggggatacggtggggatattc
cagattgaatccggaatgtttcaagggcttaacaagcgcttaaggccttcaagctttgaa
gacattatcgccattatcgcgctagggagaccgggacctatggaatcaggcatggtagat
gattttgtgaacagaaagcatggcattgagcctatcgcttatgcgtttaaagaattagag
ccgattttaaagcccacttacggcacgatcgtctatcaagagcaagtgatgcaaatcgtg
caaactattggcggttttagtttgggtgaagcggatctcatccgccgcgctatggggaaa
aaagacgctcaaatcatggcggacaataaggctaagtttgtagaaggcgctaaaaattta
gggcatgatggccaaaaagcggctaatttgtgggatttgatcgttaaatttgccggctat
ggtttcaacaaatcgcattcggccgcctatgcgatgatcactttccaaacggcgtattta
aagacttattacaagcatgagttcatggcagcgatgctcactagcgaatccaataagatt
gaatccgtggcgcgttatattgatgaggtcagggctttagaaattgaagtgatgccccca
cacatcaattcttctatgcaagatttcagcgtggcggagtttaaaaatcaaaagagcgag
ctagaaaagaaaatcgtgtttggtttaggagcgattaaaggggttgggggcgagccgatt
aaaaacatcattgaagaaagggctaaaggggattataagagtttggaagattttatttca
cgggtggatttttctaaactcactaaaaaatctttagagccattagtgaaatccgggagt
ttggataatttaggctacactagaaaaaccatgctcgctaacttggatctgatctgtgat
gctgggcgcgctaaagacaaggccaatgaaatgatgcaaggggacaactccctttttggg
gcaatggatggcggaacaaaagagcaggttattttggacatgattgatttgggcgaacat
gacgctaaaacgcttttagaatgcgaatacgagactttaggcatccatgtttcaggcaat
cccttagacgagtttaaagaagaaattaaaggctttaaaaatttagtcaaaagcattgat
attgaagagttagaaatcggttcgcaagcttatttgctgggtaaaatcatggaagttaaa
aagaaaattggcaaacgaagcggtaagccttacggcacagcggacattttggacagatac
ggcaagtttgagctcatgctgtttgaaaagcaattgagcgctttagaagagttggatatt
aataagcctttagtgtttaaatgcaagattgaagagcaagaagaagtggcgcgattaagg
ctttttgaaatcttggatttagagagcgctagggaggttaaaatccctaaagcccgttat
aaagaccctgaaaagcaaaaagaagaggtgcgcgaaatcccccccattgaaatactcgcc
tctagttcttgctctttagcgatcgtgttagaaaacgatgtgaaaaaagagtttttaaga
caaatcaaagagagcgctttaaaacatcagggtaaacgccccttgtatttgatcatcaaa
gacaaggataagcaattcaaaatccaaagcgatttaatggtgaatgaaaagattaaggac
gattttaaagggttagagtggagggatttagcttga
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integrated database retrieval system
