KEGG   Helicobacter pylori ELS37: HPELS_02110
Entry
HPELS_02110       CDS       T01798                                 
Name
(GenBank) vacuolating cytotoxin
  KO
K11028  vacuolating cytotoxin
Organism
hpe  Helicobacter pylori ELS37
Pathway
hpe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPELS_02110
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hpe02000]
    HPELS_02110
   02044 Secretion system [BR:hpe02044]
    HPELS_02110
   02042 Bacterial toxins [BR:hpe02042]
    HPELS_02110
Transporters [BR:hpe02000]
 Other transporters
  Pores ion channels [TC:1]
   HPELS_02110
Secretion system [BR:hpe02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   HPELS_02110
Bacterial toxins [BR:hpe02042]
 Type III toxins: Intracellular toxins
  Others
   Vacuolating cytotoxin
    HPELS_02110
 Type II toxins: Membrane damaging toxins
  Pore-forming toxins, Other
   HPELS_02110
SSDB
Motif
Pfam: VacA
Other DBs
NCBI-ProteinID: AFF19982
UniProt: A0ABC7ZEG3
LinkDB
Position
complement(421965..425852)
AA seq 1295 aa
MEIQQTHRKMNRPLVSLVLAGALISAIPQESHAAFFTTVIIPAIVGGIATGTAVGTVSGL
LSWGLKQAEEANKTPDKPDKVWRIQAGKGFNEFPNKEYDLYRSLLSSKIDGGWDWGNAAR
HYWVKGGQRNKLEVDMKDAVGTYKLSGLRNFTGGDLDVNMQKATLRLGQFNGNSFTSYKD
SADRTTRVNFNAKNISIDNFVEINNRVGSGAGRKASSTVLTLQASEGITSSKNAEISLYD
GATLNLASNSVKLNGNVWMGRLQYVGAYLAPSYSTINTSKVTGEVDFNHLTVGDKNAAQA
GIIASNKTHIGTLDLWQSAGLNIIAPPEGGYKNQTNNTPSQSGAKNDKNESAKNDKQESS
QNNSNTQVINPPNSTQKTEIQPTQVIDGPFAGGKDTVVNIDRINTNADGTIRVGGYKASL
TTNAAHLHIGKGGVNLSNQASGRTLLVENLTGNITVDGPLRVNNQVGGYALAGSSANFEF
KAGTDTKNGTATFNNDISLGRFVNLKVDAHTANFKGIDTGNGGFNTLDFSGVTDKVNINK
LITASTNVAVKNFNINELIVKTNGVSVGEYTHFSEDIGSQSRINTVRLETGTRSIFSGGV
KFKSGEKLVINEFYYSPWNYFDARNVKNVEITRKFASSTPENPWGTSKLMFNNLTLGQNA
VMDYSQFSNLTIQGDFINNQGTINYLVRGGKVATLNVGNAAAMMFNNDIDSATGFYKPLI
KINSAQDLIKNTEHVLLKAKIIGYGNVSTGTNGISNVNLEEQFKERLALYNNNNRMDTCV
VRNTDDIKACGMAIGNQSMVNNPDNYKYLIGKAWKNIGISKTANGSKISVYYLGNSTPTE
NGDNTTNLPTNTTNNARSANYALVKNAPFAHSATPNLVAINQHDFGTIESVFELANRSKD
IDTLYTHSGAQGRDLLQTLLIDSHDAGYARQMIDNTSTGEITKQLNAATTTLNNVASLEH
KTSGLQTLSLSNAMILNSRLVNLSRRHTNNINSFAQRLQALKGQRFASLESAAEVLYQFA
PKYEKPTNVWANAIGGASLNNGSNASLYGTSAGVDAYLNGNVEAIVGGFGSYGYSSFSNQ
ANSLNSGANNANFGVYSRIFANQHEFDFEAQGALGSDQSSLNFKSALLRDLNQSYNYLAY
SATARASYGYDFAFFRNALVLKPSVGVSYNHLGSTNFKSNSNQKVALKNGSSSQHLFNAS
ANVEARYYYGDTSYFYMNAGVLQEFAHFGSNDVASLNTFKINATRSPLSTYARAMMGGEL
QLAKEVFLNLGVVYLHNLISNIGHFASNLGMRYSF
NT seq 3888 nt   +upstreamnt  +downstreamnt
atggaaatacaacaaacacaccgcaaaatgaatcgccctttggtttctctcgttttagca
ggagcgttgattagcgccataccgcaagagagtcatgccgcctttttcacgaccgtgatc
attccagccattgttggaggtatcgctacaggcactgctgtaggaacggtctcagggctt
cttagctgggggctcaaacaagccgaagaagccaataaaaccccagataaacccgataaa
gtttggcgcattcaagcaggaaaaggctttaatgaattccccaacaaggaatacgactta
tacagatcccttttatccagtaagattgatggaggttgggattgggggaatgccgctagg
cattattgggtcaaaggcgggcaacggaacaagcttgaagtggatatgaaagacgctgta
gggacttataaactatcagggctaagaaactttactggtggggatttagacgtgaatatg
caaaaagccactttgcgtttgggccaattcaatggcaattctttcacaagctataaggat
agtgctgatcgcaccacgagagtgaatttcaacgctaaaaatatttcaattgataatttt
gtagaaatcaacaatcgtgtgggttctggagccgggaggaaagccagctctacggttttg
actttgcaagcttcagaagggatcactagcagtaaaaacgctgaaatttctctttatgat
ggcgccacgcttaacttggcttcaaacagcgttaaattaaatggtaatgtgtggatgggc
cgtttgcaatacgtgggagcgtatttagccccttcatacagcacgataaacacttcaaaa
gtgacaggggaagtggattttaaccatctcactgtgggcgataaaaacgctgctcaagca
ggtattatcgctagcaacaagactcatattggcacactggatttgtggcaaagcgcgggg
ctaaacattatcgcccctccagaaggcggttataaaaatcaaactaataataccccttct
cagagtggcgctaaaaacgacaagaatgaaagcgctaaaaacgacaaacaagagagcagt
caaaacaatagtaacactcaggtcattaacccacccaatagcacgcaaaaaacagaaatt
caacccacgcaagtcattgatgggccttttgctggcggcaaagacacggttgtcaatatt
gatcgcatcaacactaacgctgatggcacgattagggtgggagggtataaagcttctctt
accaccaatgcggctcatttgcatatcggcaaaggcggtgtcaatctgtccaatcaagcg
agcgggcgcaccctattagtggaaaatctaactgggaatatcaccgttgatgggccttta
agagtgaataatcaagtgggtggctatgctttggcaggatcaagcgcgaattttgagttt
aaggctggtacggataccaaaaacggcacagccacttttaataacgatattagtttggga
agatttgtgaatttaaaagtggatgctcatacagctaattttaaaggtattgatacgggt
aatggtggtttcaacaccttagattttagtggcgttacagacaaagtcaatatcaacaag
ctcattacagcttccactaatgtggccgttaaaaacttcaacattaatgaattgattgtt
aaaaccaatggtgtgagtgtgggggaatacactcattttagcgaagatataggcagtcaa
tcgcgcatcaataccgtgcgtttggaaactggcactaggtcaatcttttctgggggtgtc
aaatttaaaagcggtgaaaaactagttatcaatgagttttactatagcccttggaattat
tttgacgccaggaatgttaaaaatgttgaaatcaccagaaaattcgcttcttcaacccca
gaaaacccttggggcacatcaaaacttatgtttaataatctaaccctgggtcaaaatgcg
gtcatggactatagtcaattttcaaatttaaccattcagggggattttatcaacaatcaa
ggcactatcaactatctggtccgaggtgggaaagtggcaaccttaaatgtaggcaatgca
gcagctatgatgtttaataatgatatagacagcgcgaccggattttacaaaccgctcatc
aagattaacagcgctcaagatctcattaaaaatacagagcatgttttattgaaagcgaaa
atcattggttatggtaatgtttctacaggtaccaatggcattagtaatgttaatctagaa
gagcaattcaaagagcgcctagccctttataacaacaataaccgcatggatacttgtgtg
gtgcgaaatactgatgacattaaagcatgcggtatggctatcggcaatcaaagcatggtg
aacaaccctgacaattacaagtatcttatcggtaaggcatggaaaaatataggcatcagt
aaaacggctaacggctctaaaatttcggtgtattatttaggcaattctacgcctactgag
aatggtgataataccaccaacttacccaccaacaccactaataatgcgcgttctgctaac
tacgccctcgtaaagaacgctcctttcgctcacagcgccactcctaatttagtcgctatc
aatcagcatgattttggcaccattgagagcgtgtttgaattggctaaccgctctaaagat
attgacacgctttatactcattcaggtgcgcaaggcagggatctcttgcaaaccttattg
attgatagccatgatgcgggttatgccagacaaatgattgataacacaagcaccggtgaa
atcaccaagcaattgaatgcggccactaccactttaaacaacgtagccagtttagagcat
aaaaccagcggcttgcaaactttgagcttgagtaatgcgatgattttaaattctcgttta
gtcaatctctctagaaggcacaccaacaatattaactcgttcgcccaacgcttacaagct
ttaaaaggccaaagattcgcttctttagagagcgcggcagaagtgttgtatcaatttgcc
cctaaatatgaaaaacccaccaatgtttgggctaacgctattgggggagcgagcttgaat
aatggctctaacgcttcattgtatggcacaagcgccggcgtagacgcttaccttaacggg
aatgtggaagccattgtgggcgggtttggaagctatggttatagctcctttagcaatcaa
gcgaactctcttaactctggggccaataacgctaattttggcgtgtatagccgtattttt
gctaaccagcatgaatttgattttgaagctcaaggggcgctagggagtgatcaatcaagc
ttgaatttcaaaagcgctctactgcgagatttgaatcaaagctataattacttagcctat
agcgccacagcaagagcgagctatggttatgacttcgcgttttttaggaacgctttggtg
ttaaaaccaagcgtgggcgtgagctataaccatttaggttcaaccaactttaaaagcaac
agcaatcaaaaagtggctttgaaaaatggctctagcagtcagcatttattcaacgctagc
gctaatgtggaagcgcgctattattatggggacacttcatacttctatatgaacgctgga
gttttacaagagttcgctcactttggatcgaatgatgtggcgtctttaaacacctttaaa
atcaatgccactcgcagtcctttaagcacctatgcaagagcgatgatgggtggggaattg
caattagctaaagaagtgtttttgaatttgggcgtggtttatttgcacaatttgatttcc
aatataggccatttcgcttccaatttaggaatgaggtatagtttctaa

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