Helicobacter pylori ELS37: HPELS_03850
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Entry
HPELS_03850 CDS
T01798
Name
(GenBank) cag pathogenicity island protein (cag26)
KO
K15842
cytotoxicity-associated immunodominant antigen
Organism
hpe
Helicobacter pylori ELS37
Module
hpe_M00564
Helicobacter pylori pathogenicity signature, cagA pathogenicity island
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CagA_N
CagA
Motif
Other DBs
NCBI-ProteinID:
AFF20314
UniProt:
A0ABC7ZFQ6
LinkDB
All DBs
Position
complement(782038..785583)
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AA seq
1181 aa
AA seq
DB search
MTNETINQQPQTEAAFNPQQFINNLQVAFLKLDNAVASFDPDQKPIVDKNDRDNRQAFDG
ISQLREEYSNKAIKNPTKKNQYFSDFINKSNDLINKDNLIDVESSTKSFQKFGDQRYRIF
TSWVSHQNDPSKINTRSIRNFMEHTIQPPISDDKEKAEFLKSAKQSFAGIIIGNQIRTDQ
KFMGVFDESLKERQEAEKNGEPTGGDWLDIFLSFIFDKKRSSDVKEAINQEPVPHVQPDI
ATTTTHIQGLPPESRDLLDERGNFSKFTLGDMEMLDVEGVADIDPNYKFNQLLIHNNALS
SVLMGSHNGIEPEKVSLLYAGNGGFGAKHDWNATVGYKDQQGNNVATIINVHMKNGSGLV
IAGGEKGINNPSFYLYKEDQLTGSQRALSQEEILNKVDFMEFLAQNNAKLDNLSEKEKEK
FRNEIKDFQKDSKAYLDALGNDRIAFVSKKDTKHSALITEFGKGDLSYTLKDYGKKADKA
LDREKNVTLQGNLKHDGVMFVDYSNFKYTNASKNPNKGVGATNGVSHLDAGFNKVAVFNL
PDLNNLAITSFVRRNLEDKLTTKGLSLQEANKLIKDFLSSNKELVGKALNFNKAVAEAKS
TGNYDEVKKAQKDLEKSLRKREHLEKEVEKKLESKSGNKNKMEAKSQANSQKDEIFALIN
KEANRDARAIAYSQNLKGIKRELSDKLENINKDLKDFSKSFDEFKNGKNKDFSKAEETLK
ALKGSVKDLGINPEWISKVENLNAALNDFKNGKNKDFSKVTQAKSDLENSVKDVIINQKI
TDKVDDLNQAVSVAKATGDFSRVEQALADLKNFSKEQLAQQAQKNESFNVGKKSEIYQSV
KSGVNGTLVGNGLSGIEATALAKNFSDIKKELNEKFKNFNNNNNGLKNSTEPIYAKVNKK
KTGQVASPEEPIYTQVAKKVNAKIDRLNQIASGLGGVGQAAGFPLKKHDKVDDLSKVGRS
VSPEPIYATIDDLGGPFPLKKHAKVDDLSKVGLSRNQELAQKIDNLNQAVLEAKAGFFGN
LERTVDKLKDSTKHNPMNLWAESAKKVPASLSAKLDNYATNSHTRINSNIQNGAINEKAT
GMLTQKNPEWLKLVNDKIVAHNVGSVPLSEYDKIGFNQKNMKDYSDSFKFSTKLNNAVKD
VKSGFTQFLSNAFSTGYYCLARENAEHGIKNVNTKGGFQKS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgaaaccattaaccaacaaccacaaaccgaagcggcttttaacccgcagcaa
tttattaataatcttcaagtagcttttcttaagcttgataacgctgtcgcttcatttgat
cctgatcaaaaaccaatcgttgataagaacgatagggataacaggcaagcttttgatgga
atctcgcaattaagggaagaatactccaataaagcgatcaaaaatcctaccaaaaagaat
cagtatttttcagactttatcaataagagcaacgatctaatcaacaaagacaatctcatt
gatgtagaatcttccacaaagagctttcagaaatttggggatcagcgttaccgaattttc
acaagttgggtgtcccatcaaaacgatccgtctaaaatcaacacccgatcgatccgaaat
tttatggaacataccatacaaccccctatctctgatgataaagaaaaagcagagttttta
aaatctgccaaacaatcttttgcaggaatcattatagggaatcaaatccgaacggatcaa
aagttcatgggcgtgtttgatgaatccttgaaagaaaggcaagaagcagaaaaaaatgga
gagcctactggtggggattggttggatatttttttatcatttatatttgacaaaaaacga
tcttctgatgtcaaagaagcaatcaatcaagaaccagttccccatgtccaaccagatata
gccactaccaccacccacatacaaggtttaccgcctgaatctagggatttgcttgatgaa
aggggtaatttttctaaattcactcttggcgatatggaaatgttagatgttgagggagtc
gctgacattgatcccaattacaagttcaatcaattattgattcacaataacgctctgtct
tctgtgttaatggggagtcataatggcatagaacctgaaaaagtttcattattgtatgcg
ggcaatggtggttttggagccaagcacgattggaacgccaccgttggttataaagaccaa
caaggtaacaatgtggctacaataattaatgtgcatatgaaaaacggcagtggcttagtc
atagcaggtggtgagaaagggattaacaaccctagtttttatctctacaaagaagaccaa
ctcacaggctcacaacgagcattgagtcaagaagagatcctaaacaaagtagatttcatg
gaatttcttgcacaaaacaatgctaaattagacaacttgagcgagaaagagaaagaaaaa
ttccgaaatgagattaaggattttcaaaaagactctaaggcttatttagacgccctaggg
aatgatcgtattgcttttgtttctaaaaaagacacaaaacattcagctttaattactgag
tttggtaagggggatttgagctacactctcaaagattatgggaaaaaagcagataaagct
ttagatagggagaaaaatgttactcttcaaggtaacctaaaacatgatggcgtgatgttt
gttgattattctaatttcaaatacaccaacgcctccaagaatcccaataagggtgtgggt
gctacgaatggcgtttcccatttagacgcaggctttaacaaggtagctgtctttaatttg
cctgatttaaataatctcgctatcactagtttcgtaaggcggaatttagaggataaacta
accactaaaggattgtccctacaagaagctaataagcttatcaaagattttttgagcagc
aacaaagaattggttggaaaggctttaaacttcaataaagctgtagctgaagctaaaagc
acaggcaactatgatgaagtgaaaaaagctcagaaagatcttgaaaaatctctaaggaaa
cgagagcatttggagaaagaagtagagaaaaaattggagagcaaaagcggcaacaaaaat
aaaatggaagcgaaatctcaagctaacagccaaaaagatgagatttttgcgttgatcaat
aaagaggctaatagggatgcaagagcaatcgcttacagtcaaaatcttaaaggcatcaaa
agggaattgtctgataaacttgaaaatatcaacaaggatttgaaagactttagtaaatct
tttgatgaattcaaaaatggcaaaaataaggatttcagcaaggcagaagaaacactaaaa
gcccttaaaggctcggtgaaagatttaggtatcaatccggaatggatttcaaaagttgaa
aatcttaatgcagctttgaatgacttcaaaaatggcaaaaataaggatttcagcaaggta
acgcaagcaaaaagcgaccttgaaaattccgttaaagatgtgatcatcaatcaaaagata
acggataaagttgatgatctcaatcaagcggtatcagtggctaaagcaacgggtgatttc
agtagggtagagcaagcgttagccgatctcaaaaacttctcaaaggagcaattggctcaa
caagctcaaaaaaatgaaagtttcaatgttggaaaaaaatctgaaatatatcaatccgtt
aagagtggtgtaaacggaaccctagtcggtaatggattatctggaatagaggccacagct
ctcgccaaaaatttttcggatatcaagaaagaattgaatgagaaatttaaaaatttcaat
aacaataataatggtctcaaaaacagcacagaacccatttatgctaaagttaataaaaag
aaaacaggacaagtagctagccctgaagaacccatttatactcaagttgctaaaaaggta
aatgcaaaaattgaccgactcaatcaaatagcaagtggtttgggtggtgtagggcaagca
gcgggcttccctttgaaaaagcatgataaagttgatgatcttagtaaggtagggcgatca
gttagccctgaacctatttatgctacaattgatgatctcggcggacctttccctttgaaa
aagcatgctaaagttgatgatctcagtaaggtagggctttcaaggaaccaagaattggct
cagaaaattgacaatctcaatcaagcggtattagaagctaaagcaggtttctttggcaat
ctagagcgaacggtagacaagctcaaagattctacaaaacacaatcccatgaatctatgg
gctgaaagtgcaaaaaaagtgcctgctagtttgtcagcgaaactagacaattacgctact
aacagccacacacgcattaatagcaatatccaaaatggagcaatcaatgaaaaagcgacc
ggcatgctaacgcaaaaaaaccctgagtggctcaagctcgtgaatgataagatagttgca
cataatgtgggaagcgttcctttgtcagagtatgataaaattggcttcaaccagaagaat
atgaaagattattctgattcgttcaagttttccaccaagttgaacaatgctgtaaaagac
gttaagtctggctttacgcaatttttatccaatgcattttctacaggatattactgcttg
gcgagggaaaatgcggagcatggaatcaagaacgttaatacaaaaggtggtttccaaaaa
tcttaa
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integrated database retrieval system
