Helicobacter pylori ELS37: HPELS_04215
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Entry
HPELS_04215 CDS
T01798
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpe
Helicobacter pylori ELS37
Brite
KEGG Orthology (KO) [BR:
hpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpe03032
]
HPELS_04215
03400 DNA repair and recombination proteins [BR:
hpe03400
]
HPELS_04215
Enzymes [BR:
hpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPELS_04215
DNA replication proteins [BR:
hpe03032
]
Prokaryotic type
DNA Topoisomerases
HPELS_04215
DNA repair and recombination proteins [BR:
hpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPELS_04215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF4364
Toprim_4
FERM_C
Motif
Other DBs
NCBI-ProteinID:
AFF20383
UniProt:
A0ABC7ZG49
LinkDB
All DBs
Position
863579..865639
Genome browser
AA seq
686 aa
AA seq
DB search
MNNSVIIIESPNKVAKIREIIGAKVFATIGHFMQLKSYDESNGFKPTFDYDQEKKKHIFE
MIEACKNKKVYIATDPDREGYAIGYMFYQKIKNVASSIYRAEFFEITPSGINKGLQNALL
FENTNKQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREI
EKFKALPENEKVSYQIQAKINDSANREVTIKHCDEKGEEIKFNDKEEALKLFESLKDNKA
CLLKDLKNSVVETKPKKPFITSTLLEKASSMLGLSISEVQSLAQNLFEAGLITYIRTDAE
SLSVEFLDETESFYAPIYKDLYLKREYKAGKQSQAEAHEAIRITHPHTTEDLESIVYNAN
ITNQDALKLYQLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSVKGLKSAGFLAMFSKK
ELENDESNDDKDNKEKEQNAQFNLKIDDVLSLNDLVLVTIKRNAPSAYKEADFVKLLENK
GIGRPSTYASYLPTLVKREYISISQDKKHIITPTHKGKRVVEVFENAYQFIIDLTYTKQM
EEVLDEIVENKSSYVDFISNLNSKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLNL
SEEFKNYKEDNRVAKAFLDRCIKEHEFFKKNNKKASSSNNDENRPATPKQISFAEMLAKK
HNVKLPKGFKYSMKVCGDFINEYHKK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaataacagcgtcatcattattgaaagtcctaataaggtagctaagattagagaaatc
ataggagctaaggtctttgctaccatagggcattttatgcaacttaaaagctatgatgaa
agtaatggctttaagccgacttttgattatgaccaagaaaagaaaaaacatatttttgag
atgatagaggcgtgtaaaaacaaaaaggtttatatcgccactgaccctgatagagagggc
tatgctataggctatatgttttatcaaaaaatcaaaaatgtagctagttctatttatagg
gcggaattttttgaaatcacaccaagtgggattaacaagggcttacaaaacgccctttta
tttgaaaacaccaataagcaaatgtatcaaagcgctttagcaagacgagttgcagatatg
ctcttaggttttacgctatccccttatttaggtaaggctttaggacaaatgaaaggtagt
agtgctgggcgagtgcaaaccccttgtttaaaacttattgtagatagagacagagagatt
gaaaaatttaaggctttacctgaaaatgagaaagtaagctatcaaattcaagctaagatt
aacgatagtgctaacagagaagtaactatcaagcattgtgatgaaaagggcgaagagatt
aaattcaatgataaagaagaggctttaaaactctttgagagcttaaaggataataaagct
tgtcttttaaaggatttaaaaaactctgttgtagagactaaacctaaaaagccctttatc
acttctacgcttttagaaaaagcaagttctatgcttggtttaagtattagcgaagtgcaa
tcactagctcaaaatctctttgaggctggactgattacttacattaggacagatgcggaa
agtttgagcgtggagtttttagatgagacagagagcttttatgcacctatttataaggac
ttgtatttaaaaagagaatacaaggctggcaagcaaagccaagcagaagcccatgaagca
attcgcatcacacacccccatactactgaagatttagaaagcatagtctataatgctaat
attactaatcaagacgctttaaaactctatcaactcatttttgaaaggactattgaaagt
caaggcaagaatgccatttatgacaagcaagatttgctctttaaaatcaaaaacgagtat
tttaaatgttctgtaaagggtttaaaaagtgctggatttttagcaatgttttctaaaaaa
gagctagaaaatgatgaaagtaatgatgataaagacaataaagaaaaagaacaaaacgca
caatttaatctaaaaattgatgatgtgttaagtctaaatgacttagttttagtcaccatt
aaaagaaatgccccaagtgcctataaagaggcagattttgtcaagcttttagaaaataaa
ggcataggcagacctagcacttatgcgagctatttgcctacgcttgtaaaaagagaatat
atcagcattagccaagataaaaaacacattattacgcctacacataagggtaaaagagtg
gtagaagtgtttgaaaatgcttatcaattcattattgatttgacctatactaaacaaatg
gaagaagtgctagatgagattgtagaaaataaaagctcttatgtggattttatcagcaat
ttaaattctaaatgccctaagattgaaaagctagaaagaaatgatgatgagataaaacct
agcagtgaaggacaaatcacttatatagaaaatattttaagagatttgcaattaaattta
agcgaagagtttaaaaactacaaagaagacaacagagtggctaaggcgtttttagaccga
tgcattaaagagcatgagttttttaagaaaaacaacaaaaaggctagtagctctaataat
gatgaaaatagacccgctacgcctaaacaaattagctttgctgagatgttggctaaaaag
cataatgtcaagctccccaaaggatttaaatatagtatgaaagtgtgtggggattttatc
aatgagtatcataagaagtag
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