Helicobacter pylori ELS37: HPELS_05045
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Entry
HPELS_05045 CDS
T01798
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hpe
Helicobacter pylori ELS37
Pathway
hpe03410
Base excision repair
hpe03430
Mismatch repair
hpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPELS_05045
03430 Mismatch repair
HPELS_05045
03440 Homologous recombination
HPELS_05045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpe03400
]
HPELS_05045
DNA repair and recombination proteins [BR:
hpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HPELS_05045
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPELS_05045
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HPELS_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Fe-S_biosyn
GLUCM-like_C
Motif
Other DBs
NCBI-ProteinID:
AFF20539
UniProt:
A0ABC7ZGD8
LinkDB
All DBs
Position
1031107..1032657
Genome browser
AA seq
516 aa
AA seq
DB search
MKQKLKAQIKERVASIAYNEKGFPSPFLFKDLKKAALKIIEAMRANTEILVVGDYDADGV
ISSAIMAKFFESLNYKHVRIAIPNRFMDGYGISKKFLEKHHAPLIITVDNGINAFEAARF
CKEKNYTLIITDHHCLNNDEVPDAYAVINPKQPDCDFIQKEVCGALVAFYLCYGIHQLLG
KEKSHSSELLCLAGVATIADMMPLTFFNRFLVSKALYFLQKESLGAMGFLRQREVFRKRS
LKASDISFNIAPLINSAGRMQDAKMALDFLSANNFQDGYSLYERLKACNLKRKMIQQQVF
EEAFKHAMVGEKIIIAFKDNWHEGVLGIVASKLVEATQKPSLVFTFKEGVYKGSGRSSPN
IDLIDALNGVSSLLLGYGGHRQACGLSVGKNNIVSLFETLENFDFKVLPFCEKEPPLTLK
LKDIDRELLEIIEAGEPYGQENPEPLFQARNLEVIEEKIIKESHQILRFKDKECVKEAIY
FNAERFLKAGEKVSVLFSVELDECSNEPKMFVKSLL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaagcttaaagctcaaatcaaagagcgagtggcttctatcgcctataatgaa
aaagggtttcctagcccctttttatttaaagacttgaaaaaagccgcactcaaaatcata
gaagccatgcgtgcaaacacagaaattttagtggtgggcgattatgacgctgacggcgtg
attagctctgctatcatggcaaaattttttgaaagcctgaactataagcatgtgcgcatt
gcaatccctaatcgcttcatggatggctatgggatttctaaaaaatttttagaaaaacac
cacgcccctttaatcatcacggtggataatgggattaacgcctttgaagccgcgcgattt
tgcaaagaaaaaaactacaccctaatcatcaccgatcaccattgcttaaataatgatgaa
gtcccagacgcttatgcggtgatcaaccctaagcaaccggattgtgattttatccaaaag
gaagtgtgcggggcgttagtggcgttttatttgtgctatggcatccatcagcttctagga
aaagaaaaaagccattctagcgagttgttgtgtttagcgggcgtggcgactattgctgac
atgatgcctttgactttttttaaccgctttttggtttctaaagccttgtattttttgcaa
aaagaatccttaggagcgatggggtttttgcgccaaagagaagtttttagaaaacgctct
ttaaaagcgagcgatatttcttttaacatcgcccctttaatcaactccgcagggcgcatg
caagacgctaaaatggctttagattttttaagcgcgaataattttcaagatggctattct
ttgtatgaacgcttgaaagcatgcaatttgaagcgcaaaatgatccaacagcaggttttt
gaagaagcttttaagcatgcgatggttggagaaaaaatcatcatcgcttttaaggataat
tggcatgagggcgtgcttgggattgtggcttcaaaattagtggaagccactcaaaagcca
agcctggtttttacctttaaagaaggggtgtataaagggagcggacgcagttctccaaac
attgacttgattgacgctttgaatggggtttcttctttattactcggctatggagggcat
aggcaagcttgcggtttgagcgttggaaaaaacaatatcgtctcgctctttgaaacttta
gaaaattttgattttaaagtcttgcctttttgtgaaaaagaaccccctttaacgctcaaa
ttaaaagacattgacagagagcttttagagattatagaagcgggcgaaccttatgggcaa
gaaaaccctgaacccctattccaagcaagaaatttagaagtcatagaagaaaaaatcatt
aaagaaagccaccagattttgcgttttaaggataaagaatgcgtcaaagaggctatttat
tttaacgctgagcggtttttgaaagcgggtgaaaaggtgagcgtgctttttagcgtggaa
ttagatgagtgttctaatgagcctaaaatgtttgttaaaagtttgttgtag
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