Helicobacter pylori ELS37: HPELS_05520
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Entry
HPELS_05520 CDS
T01798
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hpe
Helicobacter pylori ELS37
Pathway
hpe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPELS_05520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpe03019
]
HPELS_05520
03009 Ribosome biogenesis [BR:
hpe03009
]
HPELS_05520
Enzymes [BR:
hpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPELS_05520
Messenger RNA biogenesis [BR:
hpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPELS_05520
Ribosome biogenesis [BR:
hpe03009
]
Prokaryotic type
rRNA helicases
HPELS_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Cas3-like_C_2
AAA_30
AAA_22
UvrD-helicase
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AFF20629
UniProt:
A0ABC7ZGK2
LinkDB
All DBs
Position
complement(1126248..1127726)
Genome browser
AA seq
492 aa
AA seq
DB search
MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERSEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDVKVSEGIISLYEQLTEIFEPS
QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKTPNKKTHQHEQARSFKKGQHRDRHP
KTNRYSKKPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaatcaaccaccactccctacagaaattgatgatgacgcttatcataagccg
agttttaatgacttgggcttaaaagaatcggttttaaaatccgtttatgaagccggcttc
acttccccaagccccattcaagaaaaggccattccggctgttttgcaaggccgagatgtc
atcgcgcaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacaccatagaggccttagtgatcacgcccaccagagaattagcc
atgcaaattagcgatgagatttttaaattgggcaaacacaccaggactaaaaccgtgtgc
gtgtatggaggccagagcgttaaaaaacaatgcgaattcattaagaaaaacccccaagtg
atgatcgccacgccaggaaggctattggatcatttgaaaaacgagcgcatccataaattt
gtgcctaaagtggtcgttttagatgaaagcgatgaaatgctggatatggggtttttagac
gatattgaagagatttttgactacctccctagcgaagcacagattttgcttttttcagcc
acgatgccagagccgattaaaagattagcggataaaattttagaaaaccctattaaaatc
catatcgctccttctaatatcactaacaccgacatcacccaacgcttttatgtgatcaac
gaacatgaaagatctgaagcgatcatgcgccttttagacacccaagcgcccaaaaagagc
attgttttcacgcgcactaaaaaagaggccgatgaattgcaccagttccttgcttctaaa
aattacaaaagcaccgccttgcatggggatatggatcaaagggatcggcgcgcttctatc
atggcgtttaaaaaaaatgacgctgatgtgttggtggctacagatgtggcgagtcgtggg
ctagacattagcggtgtaagccatgtgttcaattaccacttgcccctaaacaccgagagc
tatatccatcgcattgggagaaccgggcgagcgggcaaaaaaggcatggcgatcacttta
gtaacccccttagaatacaaagagcttttacgcatgcaaaaagaaattgattcagagatt
gaactttttgaaatccccaccattaacgaaaaccagatcatcaaaaccttgcatgacgtt
aaagtgtctgaagggatcatcagtctttatgaacagcttaccgaaatttttgagccgtct
caattggttttaaaacttttgagtttgcagtttgaaaccagtaaaattggcttgaaccag
caagagattgatgcgatccaaaaccctaaagaaaaaacgccaaaaacccctaacaaaaaa
acgcaccagcatgagcaagcgcgttctttcaaaaagggtcagcacagagacagacacccc
aaaacgaatcgttattctaaaaaacccaaacgccgttaa
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