Halopseudomonas pelagia: EAO82_00690
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Entry
EAO82_00690 CDS
T07735
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
hpeg
Halopseudomonas pelagia
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpeg03019
]
EAO82_00690
Messenger RNA biogenesis [BR:
hpeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EAO82_00690
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
HDOD
MIOX
Motif
Other DBs
NCBI-ProteinID:
QFY55015
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All DBs
Position
140711..141640
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AA seq
309 aa
AA seq
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MNQYNPPIIHGQDHEVFCLAGCLVPQQAYQVSPLKSAIFLVLENLFGCHEVLLGVEDHPA
TWPSKGLVAVSMQATRHGSYLLGEDSQVMTPQNFESLCHLPVSRVSSMDTVMGVEQWLEL
CPFPPLKRFVYQVLGVPAVGCSFFNLPASARHHHCYPGGLAEHSLEVAQSVYAASGCFPE
HERWLAAVAGLLHDLGKVRSFHPDGSRTETGYLVSHELLGLELALPALAQLDTHWPDGAN
ALRYLFDWILRPKQQRPLMPIALTIRQADVMSAAASNRQRAFSKLPAWQTFAKDQGPGPT
SSYWLPSPP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatataacccgcccattattcatgggcaggatcatgaggtgttctgcctggcc
ggttgcttggtaccgcagcaggcttaccaggtgtcacctctgaaatcagccatctttctt
gttttagaaaatctgttcggctgccatgaggtactgctgggcgtggaagatcaccctgcg
acttggccctccaaaggtttggttgccgtcagcatgcaggcgaccagacacggtagttat
ctgctcggcgaggatagtcaggtaatgacaccgcagaactttgaatcgctatgtcacctg
ccagtcagccgggtcagctcgatggatactgtgatgggcgttgagcaatggctggagctc
tgcccgtttccgcccttgaagaggtttgtctatcaggtattgggagtgcccgcagttggc
tgctcttttttcaatcttcccgccagtgcccgccatcaccactgttatcccggtgggctg
gccgaacacagcctggaagtcgcgcaatcggtttatgccgcaagcggctgttttcccgag
catgaacgttggctagcagcggttgccgggctgctgcatgacctcggcaaggtccgcagc
tttcatcctgacggaagccgaaccgagacgggttatctggtaagccatgaactactgggg
ctggaactggcattaccagcgctagctcagctcgacacgcattggcctgacggagccaat
gcactgcgctacctgtttgactggatacttcgccccaaacagcaaaggcctttgatgccg
attgcgctaaccattagacaagctgacgtaatgagcgctgccgccagcaatcgtcaaagg
gcgttcagcaagctacccgcgtggcaaaccttcgccaaggatcaaggccccgggcccacc
agcagctactggctgccgagcccgccgtag
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