Halopseudomonas pelagia: EAO82_00805
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Entry
EAO82_00805 CDS
T07735
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K03701
excinuclease ABC subunit A
Organism
hpeg
Halopseudomonas pelagia
Pathway
hpeg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EAO82_00805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpeg03400
]
EAO82_00805
DNA repair and recombination proteins [BR:
hpeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAO82_00805
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EAO82_00805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_16
AAA_21
RsgA_GTPase
AAA_29
AAA_22
UvrA_DNA-bind
nSTAND3
AAA_14
AAA_33
AAA_18
nSTAND1
nSTAND_NTPase5
AAA_23
FtsK_SpoIIIE
NACHT
ATPase
AAA_19
Viral_helicase1
DUF87
NB-ARC
SbcC_Walker_B
cobW
nSTAND6
ATPase_2
MeaB
DnaJ_CXXCXGXG
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QFY55036
UniProt:
A0AA91U217
LinkDB
All DBs
Position
161890..165441
Genome browser
AA seq
1183 aa
AA seq
DB search
MSAKKTFFEITGITENNLKNIDFYAEAAEVILINGVSGSGKSTLVNQVIAAEAMRQSKLR
RKSDNLFDYCVRPNFQAATRMPESAIISQRSVMPSASSTFGTRTGLNDLLIRLFVQRGEI
HYRGSTISKPSIETIIQFRQLYHPQARILGCIARYEEIGRTQIDLLRNAGIKQVFLRAEG
KHALRPLALGKLVTSKLTACEVFIDLDIGDAPALLKKSKAVPVLMDDSLEIDFNECGVAL
EDGTVFRLPSKLLFSRSAMSSHSGCCRVCGGTGTVTHYDVERTVDGQAPLKNGFLNVPLS
PSGRYKGFKFLPSGLLALLKKEGIDVNKSYCSLSNEHKSTILNILKDKLARNNNDPAAQQ
FISIEPCNDCEGSGLGWQARSVTFNGKSIAYFFGLTPSKLLTELLFPVTNKDDGMHKLRV
VLDYLSALSIDHINLNRPTLSMSSGELQRMRLLPVLINQYSGRLVIIDEPSSNLQYRDNL
KILQLINQLRARNNSILIVDHNPVYRTIADRTVKIGPGPGHRGGFYCVADDYAQSVAGLG
NLVKNFKPAADFKYITLELQRLRSLHLEKVRIPYSAFTAIIGSSGAGKSTLCRELIYPAL
LQRSENVVLLDSTPPRGASNSIVATYLNVFDKIRKFYAQSDGCELAESDFSFNSTGACGH
CQGTGIVAEQVCSLCFGSRFRSEIALLGVEGITLTDLLAADLDQIPLDGGLAFLSAAINI
LKRLSLSHLSLGRKTGSLSGGELQRLKVARFLMAHQSDRNSSSSFVILDEPCRGLDPQAV
KDLFETLKDFLSDATVLVIEHNPHFIYRCEFIIDMGEGSGLKDDSTVVQGQIGEKEFPSL
NHARILTESGSPNGLLIPCEETDLHIEDDEFPKELNGKRYGLILPLFIKQKNFALEEKFS
EYFNLVTPDDNIFLHRSREALERALQKERRFFFNPFIALLERFPRVPISLQREILKKFDK
RNIDCDDNPWSFRVCADSLQSAYLNGAGVVIVPRTNGNFDYHTVRLLSLHERVVDRAFPH
EFAFNLYRNSCHYCSGYGHIQSYPLREWINSSCSVLESDFMHYPLHKVIPKATIKRFAKE
ELFDLSKPAVTLSEHELNILLYGFKAYKFRKRDERDDSESAFFEWRGVNSYLYRNAEKLS
PGKNINNSIEWLTCPFCIQGYSDKVRFYGFEGGVITDFLREDL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaaaaagaccttctttgaaatcaccggtattaccgagaacaatctcaagaac
attgacttctatgcagaagccgcagaagtgattttgattaatggtgttagcgggtctgga
aaatccaccttagtcaatcaggtaatagcggctgaggcaatgcggcagagcaagctacgc
cgcaagagcgataatctctttgattactgtgtccgccctaattttcaggccgcaactcgc
atgcctgagtcagccataatttctcagcgctccgtcatgccttctgcgtcatcgaccttc
ggaacacgaacaggactcaatgatttgctgatcaggctattcgttcagcggggcgagatt
cattatcgcgggagcacgatttctaaaccgagtattgagactatcatacagtttcgtcag
ctgtatcacccgcaggctcgaatactaggttgcattgctcgctatgaggaaattggacgt
acccaaatagaccttctacgtaatgctgggatcaagcaggttttccttcgggcagaagga
aaacatgcactgaggccacttgctctgggcaagctggtcacctccaagcttactgcatgt
gaggtcttcattgatttagatattggcgatgccccagctctgttgaaaaaaagcaaagca
gtcccagtactgatggatgactcccttgagatagatttcaacgaatgcggcgttgcgcta
gaagacgggacggtctttaggttgccatccaaactgttgttttcacgctcagcaatgtcg
tcccactcaggatgctgccgagtatgtggcggcactggaactgtgactcactacgatgtt
gaacggaccgttgatggacaggctccattaaaaaacggtttcctgaatgtcccgctctcc
ccatcgggacgttacaaaggttttaagtttctaccttctggcctcttagccttgctgaag
aaggaaggaatcgatgttaataagtcatattgctctctcagtaatgagcacaaatcaaca
attctgaatattttgaaagacaagctagcccgaaacaataacgaccccgcagctcagcaa
tttatttctattgagccatgcaatgactgcgagggaagtggcttaggctggcaggctcga
tcggtcaccttcaatggaaagtccatagcctactttttcgggctaacaccatccaaatta
cttaccgagttactatttccggttactaataaggatgatggcatgcacaagctacgagtc
gtgctggattacctatcggcgctgtccattgaccacatcaatctgaacagacctactttg
agcatgagctcaggtgaacttcaaagaatgaggttactgcctgtactaatcaatcaatat
tcaggacgcctcgtaattattgatgagccctcctcgaacctacaatatcgtgacaaccta
aaaatactccaactcatcaatcagctaagagcgcgcaacaattcgattctcattgtggac
cataacccggtgtatcgcacgatcgctgataggacagtaaagattggacctggtccggga
cataggggcggtttttactgcgtagctgacgattacgctcaatcagtcgctggcttgggc
aatttggttaaaaatttcaagccagcagccgattttaaatatatcaccctcgagttacaa
cgcttacgatctctacatttggaaaaggtacgtattccttatagtgctttcaccgcaatt
atcggatccagtggggcaggaaagtctacattatgtcgcgaactaatctacccggcacta
ctgcagcgtagtgaaaacgtcgttctgcttgacagcactccaccgcgtggcgcctcaaac
tctattgtggctacctaccttaacgtattcgataaaatacgaaagttttatgcccaaagt
gacggttgcgagttagctgaaagcgatttcagttttaattcaacgggggcatgcggtcac
tgccaaggcacgggtattgttgccgaacaggtctgcagtctgtgctttggtagtcgcttc
agatctgaaatagcgctattaggtgttgagggaattactcttactgatctattggccgcc
gacctagaccaaattcctttggacggcggactagcctttctctctgcagcgataaatatt
ttgaaacggctttctctttctcaccttagtttggggcgaaagaccggaagtcttagcggt
ggcgaactgcagagactaaaagtcgccagattcttaatggcgcatcagtctgaccgcaac
tctagtagctcgtttgtgatcctggacgagccttgccgtgggcttgaccctcaagcagtg
aaagaccttttcgaaacactgaaggattttctgtcagatgcgactgtattagtaatcgag
cacaatcctcattttatatacaggtgcgaattcataatagatatgggcgagggctctggg
cttaaagacgactccacggtggttcaagggcaaataggagagaaagaattccccagtctc
aatcacgcgcggatattgacagagtctggttcgcctaacggtcttctaattccttgtgaa
gaaactgatcttcacatcgaggatgacgagtttcctaaggagctaaacggaaaacgttat
gggttaatccttccactttttatcaagcagaaaaactttgctctcgaagagaaattcagt
gaatattttaaccttgtaacccctgatgacaatatttttttacacagaagtcgagaagcg
ttggagcgcgcattgcagaaggagcgccggtttttcttcaatccgttcattgcgctacta
gagcgtttcccacgagtaccgatatcactgcagcgagaaattctcaagaaattcgacaag
cgcaatatcgactgcgatgataatccttggtcatttagggtgtgtgccgattcgctgcag
tcagcttacttgaatggagccggcgtggtaatagtgcctaggacaaacgggaactttgac
tatcacacagtacgcttattaagccttcatgagcgcgtagtagatcgagccttccctcac
gagttcgcttttaatttatataggaactcctgccactattgcagcggttacggccacatt
cagagctaccccttaagagagtggatcaattcctcatgctccgttctcgaaagtgatttc
atgcactaccccttacataaagtgatccctaaggcgacgattaagcgtttcgccaaggag
gagctatttgatctttcaaagcctgctgtaactttatccgagcatgaactaaacatccta
ctttatggcttcaaggcatataaatttagaaagcgagatgaacgcgatgactcagagtca
gcattctttgagtggcgtggagtgaactcctacctgtatcgtaatgccgaaaagctgagt
ccaggcaaaaacatcaataattccatagagtggttaacttgccctttctgcatacaggga
tattccgacaaggtcaggttttatgggtttgaaggcggtgttattactgacttcttgaga
gaggatttatag
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